Os09g0569400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-lactamase-like domain containing protein.
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Os09g0569400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-lactamase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.84 | 0.193 | 10.8 | 0.497 | 0.442 | 0.336 | -0.169 | -0.0647 | 0.281 | 20.6 | 53.23 | 1294 | -- | -- |
| 16.84 | 0.191 | 10.8 | 0.491 | 0.449 | 0.338 | -0.16 | -- | 0.281 | 20.7 | 53.15 | 1262 | -- | -- |
| 16.92 | 0.192 | 10.8 | 0.501 | 0.448 | 0.342 | -- | -0.0269 | 0.281 | 20.7 | 52.99 | 1268 | -- | -- |
| 16.92 | 0.192 | 10.8 | 0.496 | 0.45 | 0.341 | -- | -- | 0.28 | 20.7 | 53 | 1262 | -- | -- |
| 27.27 | 0.243 | 10.8 | 0.501 | -- | 0.343 | -- | -0.136 | 0.285 | -- | 58.35 | 1417 | -- | -- |
| 19.3 | 0.206 | 10.8 | 0.473 | 0.435 | -- | -0.186 | -- | 0.265 | 20.2 | -- | -- | -- | -- |
| 19.4 | 0.206 | 10.8 | 0.479 | 0.435 | -- | -- | -- | 0.265 | 20.2 | -- | -- | -- | -- |
| 27.29 | 0.243 | 10.8 | 0.483 | -- | 0.349 | -- | -- | 0.287 | -- | 61.03 | 1414 | -- | -- |
| 23.23 | 0.224 | 10.8 | -- | 0.446 | 0.363 | -- | -- | 0.262 | 20.7 | 65.8 | 1278 | -- | -- |
| 29.84 | 0.255 | 10.8 | 0.475 | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
| 25.44 | 0.236 | 10.8 | -- | 0.433 | -- | -- | -- | 0.212 | 20.3 | -- | -- | -- | -- |
| 33.32 | 0.269 | 10.8 | -- | -- | 0.382 | -- | -- | 0.244 | -- | 65.92 | 1428 | -- | -- |
| 35.8 | 0.279 | 10.8 | -- | -- | -- | -- | -- | 0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.69 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 2 | 16.71 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 6 | 16.76 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 27 | 16.79 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 28 | 16.79 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 30 | 16.80 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 45 | 16.81 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 46 | 16.81 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 47 | 16.82 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 48 | 16.82 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 52 | 16.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 54 | 16.83 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 55 | 16.83 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 56 | 16.83 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 57 | 16.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 6 |
| 62 | 16.84 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 69 | 16.84 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 78 | 16.85 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 82 | 16.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 84 | 16.85 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 114 | 16.86 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 124 | 16.87 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 126 | 16.87 | wind | 7 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 138 | 16.88 | radiation | 20 | 1440 | < th | dose dependent | sin | 19 | NA |
| 140 | 16.88 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 153 | 16.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 158 | 16.89 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 160 | 16.89 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 166 | 16.89 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 197 | 16.90 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 201 | 16.91 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 212 | 16.91 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 226 | 16.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 229 | 16.92 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 239 | 16.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 241 | 16.92 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 378 | 16.94 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 399 | 16.94 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 400 | 16.94 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 405 | 16.94 | radiation | 40 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 408 | 16.94 | radiation | 40 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 473 | 16.95 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 497 | 16.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 529 | 16.97 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 555 | 16.97 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 557 | 16.97 | radiation | 1 | 1440 | > th | dose dependent | sin | 17 | NA |
| 577 | 16.98 | radiation | 10 | 1440 | > th | dose independent | sin | 21 | NA |
| 594 | 16.98 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 601 | 16.98 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 647 | 16.98 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 653 | 16.99 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 655 | 16.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 665 | 16.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 752 | 16.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 759 | 16.99 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 795 | 16.99 | humidity | 50 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 799 | 16.99 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 800 | 16.99 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 803 | 17.00 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 807 | 17.00 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 821 | 17.00 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 839 | 17.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 855 | 17.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 1 | 17 |
| 912 | 17.00 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 918 | 17.00 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 924 | 17.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 931 | 17.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 935 | 17.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 962 | 17.01 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 9 |