BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0569400 Os09g0569400|AK063384
(738 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23880.1 | chr5:8052550-8058147 FORWARD LENGTH=740 1063 0.0
AT1G61010.1 | chr1:22474954-22477660 REVERSE LENGTH=694 142 4e-34
AT2G01730.1 | chr2:320597-323845 FORWARD LENGTH=614 131 1e-30
>AT5G23880.1 | chr5:8052550-8058147 FORWARD LENGTH=740
Length = 739
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/742 (70%), Positives = 614/742 (82%), Gaps = 7/742 (0%)
Query: 1 MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL 60
MGTSVQVTPL G Y E PL YL+++DGF FL+DCGW DL D S L+PL++VA TIDAVLL
Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60
Query: 61 SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID 120
SH DT+H+GALPYAMK LGLSAPVYATEPV RLG+LT+YD F+SR+QVSDFDLFTLDDID
Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120
Query: 121 AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE 180
+AFQNV+RL YSQN+ L+ KGEGIVIAPHVAGH LGG++W+ITKDGEDV+YAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180
Query: 181 RHLNGTALGSFVRPAVLITDAYNAL-NNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTA 239
RHLNGT L SFVRPAVLITDAY+AL N ++Q+D++F+D + K L GG+VLLP+DTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240
Query: 240 GRVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAF 299
GRVLE+LLILEQ+W+QR +PIYFLT VS+ST+DYVKSFLEWM+DSISKSFE +RDNAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300
Query: 300 LLKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFG 359
LL+ VT +INK +L+ PKVVLASMASLE GF+ +IFV+ AN+ +NLVLFTE GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360
Query: 360 TLARMLQVDPPPKAVKVTMSKRIPLVGDELKAYXXXXXXXXXXXALKASLNKEEEKKASL 419
TLARMLQ PPPK VKVTMSKR+PL G+EL AY AL+ASL KEEE KAS
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420
Query: 420 GSNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDD 479
GS+ +S+PM+ID T+ GS DILIDGFVPPSSSVAPMFP+++NTSEWDD
Sbjct: 421 GSDDNSSEPMIIDTKTTH--DVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 478
Query: 480 FGEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKC 539
FGE+INP+DY++K E+MD M GD +D LDE +A L+LD+ PSKV+SNE+ V V C
Sbjct: 479 FGEIINPDDYVIKDEDMDRGAMHNGGD-VDGRLDEATASLMLDTRPSKVMSNELIVTVSC 537
Query: 540 SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEE 599
SL MD+EGRSDGRS+KS+IAHV+PLKLVLVH AEATEHLK HC N HVYAPQIEE
Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597
Query: 600 TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTD-DKLTLLPPSSTPAAH 658
T+DVTSDLCAYKVQLSEKLMSNVI KKLG+ E+AWVD+EVGKT+ D +LLP + H
Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPH 657
Query: 659 KSVLVGDLKLADFKQFLANKGLQVEFA-GGALRCGEYITLRKIGDAGQK-GSTGSQQIVI 716
K VLVGDLK+ADFKQFL++KG+QVEFA GGALRCGEY+TLRK+G GQK G++G QQI+I
Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717
Query: 717 EGPLCEDYYKIRELLYSQFYLL 738
EGPLCEDYYKIR+ LYSQFYLL
Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739
>AT1G61010.1 | chr1:22474954-22477660 REVERSE LENGTH=694
Length = 693
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 35/383 (9%)
Query: 2 GTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCG------------WTDLCDPSHLQPLA 49
G + VTPL G C ++ G L DCG + D DPS
Sbjct: 19 GDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDEIDPS------ 72
Query: 50 KVAPTIDAVLLSHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYF-ISRRQV 108
+ID +L++H H +LPY ++ + V+ T + L L DY +S+ V
Sbjct: 73 ----SIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSV 128
Query: 109 SDFDLFTLDDIDAAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGED 168
D LF DI+ + + + + Q +N GI + AGH LG ++ + G
Sbjct: 129 EDM-LFDEQDINKSMDKIEVIDFHQTVEVN----GIKFWCYTAGHVLGAAMFMVDIAGVR 183
Query: 169 VVYAVDFNHRKERHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTG 228
++Y D++ ++RHL L F P + I ++ + + H + +++ F D + +
Sbjct: 184 ILYTGDYSREEDRHLRAAELPQF-SPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQ 242
Query: 229 GGSVLLPIDTAGRVLEILLILEQYWAQRHLIY--PIYFLTNVSTSTVDYVKSFLEWMNDS 286
GG VL+P GR E+LLIL++YWA ++ PIY+ + ++ + ++++ MND
Sbjct: 243 GGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDR 302
Query: 287 ISKSFEHTRDNAFLLKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEA 346
I F ++ N F+ K ++ + + D+ +G P VV+A+ L+ G S +F ++
Sbjct: 303 IRNQFANS--NPFVFKHISPLNSIDDFNDVG--PSVVMATPGGLQSGLSRQLFDSWCSDK 358
Query: 347 KNLVLFTEKGQFGTLARMLQVDP 369
KN + GTLA+ + +P
Sbjct: 359 KNACIIPGYMVEGTLAKTIINEP 381
>AT2G01730.1 | chr2:320597-323845 FORWARD LENGTH=614
Length = 613
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 168/366 (45%), Gaps = 25/366 (6%)
Query: 17 GPLCYLLAVDGFRFLLDCGWTDLCDPSHLQP----LAKVAP---TIDAVLLSHADTMHLG 69
G C ++ ++G + + DCG CD + P ++K I ++++H H+G
Sbjct: 15 GKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMDHVG 74
Query: 70 ALPYAMKHLGLSAPVYATEPVFRLGILTLYDY---FISRRQVSDFDLFTLDDIDAAFQNV 126
ALPY + G + P+Y + P L L L DY + RR + +LFT I + V
Sbjct: 75 ALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRR--GEEELFTTTHIANCMKKV 132
Query: 127 VRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKERHLNGT 186
+ + Q ++ E + I + AGH LG + +VY D+N +RHL G
Sbjct: 133 IAIDLKQTIQVD---EDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL-GA 188
Query: 187 ALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAGRVLEIL 246
A ++ +LI+++ A K ++++F+ A+ K + GGG L+P GR E+
Sbjct: 189 AKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELC 248
Query: 247 LILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLKCVTQ 306
++L+ YW + ++ PIYF + ++ Y K + W + ++ + +H N F K V
Sbjct: 249 MLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKE--KHNTHNPFDFKNV-- 304
Query: 307 IINKDELEKLGDAPK--VVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLARM 364
KD L AP V+ A+ L GFS ++F A NLV GT+
Sbjct: 305 ---KDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHK 361
Query: 365 LQVDPP 370
L P
Sbjct: 362 LMAGKP 367
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,955,025
Number of extensions: 676168
Number of successful extensions: 1569
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1554
Number of HSP's successfully gapped: 3
Length of query: 738
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 632
Effective length of database: 8,200,473
Effective search space: 5182698936
Effective search space used: 5182698936
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)