Os09g0566100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENTH/VHS domain containing protein.
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Os09g0566100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ENTH/VHS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.4 | 0.287 | 9.57 | 1.22 | 0.768 | -0.0907 | 0.13 | 4.21 | 0.0667 | 8.21 | 24.41 | 704 | -- | -- |
| 40.51 | 0.299 | 9.66 | 0.494 | 0.783 | 0.458 | -0.68 | -- | -0.151 | 7.26 | 24.41 | 704 | -- | -- |
| 37.43 | 0.285 | 9.57 | 1.19 | 0.77 | -0.0776 | -- | 4.02 | 0.0589 | 8.19 | 24.35 | 700 | -- | -- |
| 41.7 | 0.303 | 9.65 | 0.49 | 0.77 | 0.501 | -- | -- | -0.106 | 7.49 | 26.9 | 4752 | -- | -- |
| 64.69 | 0.375 | 9.5 | 1.97 | -- | -0.519 | -- | 6.14 | 0.265 | -- | 25.68 | 2073 | -- | -- |
| 44.07 | 0.311 | 9.65 | 0.569 | 0.732 | -- | -0.628 | -- | -0.101 | 8.08 | -- | -- | -- | -- |
| 45.22 | 0.315 | 9.65 | 0.553 | 0.73 | -- | -- | -- | -0.0997 | 8.21 | -- | -- | -- | -- |
| 70.89 | 0.392 | 9.66 | 0.428 | -- | 0.263 | -- | -- | -0.067 | -- | 29.48 | 5810 | -- | -- |
| 44.19 | 0.31 | 9.7 | -- | 0.734 | 0.445 | -- | -- | -0.326 | 8.28 | 20.7 | 47520 | -- | -- |
| 74.65 | 0.404 | 9.67 | 0.558 | -- | -- | -- | -- | -0.0913 | -- | -- | -- | -- | -- |
| 53.27 | 0.341 | 9.66 | -- | 0.733 | -- | -- | -- | -0.161 | 8.16 | -- | -- | -- | -- |
| 74.02 | 0.401 | 9.72 | -- | -- | 0.439 | -- | -- | -0.316 | -- | 20.6 | 47520 | -- | -- |
| 82.87 | 0.425 | 9.68 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.52 | temperature | 25 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 3 | 36.80 | temperature | 25 | 270 | > th | dose dependent | sin | 13 | NA |
| 5 | 37.11 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 15 |
| 9 | 37.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 11 |
| 11 | 37.23 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 15 | 37.29 | temperature | 25 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 27 | 37.43 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 33 | 37.47 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 36 | 37.49 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 10 |
| 39 | 37.49 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 40 | 37.50 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 42 | 37.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 45 | 37.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 47 | 37.52 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 3 |
| 48 | 37.52 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 50 | 37.52 | temperature | 20 | 270 | > th | dose dependent | sin | 16 | NA |
| 53 | 37.52 | temperature | 25 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 73 | 37.56 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 19 |
| 99 | 37.59 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 7 |
| 144 | 37.66 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 3 |
| 204 | 37.72 | temperature | 25 | 720 | > th | dose dependent | sin | 20 | NA |
| 211 | 37.73 | temperature | 25 | 90 | > th | dose independent | sin | 13 | NA |
| 218 | 37.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 232 | 37.73 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 237 | 37.74 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 286 | 37.80 | temperature | 25 | 10 | > th | dose independent | rect. | 17 | 7 |
| 291 | 37.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 3 |
| 293 | 37.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 339 | 37.88 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 355 | 37.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 14 |
| 357 | 37.90 | temperature | 20 | 10 | > th | dose dependent | sin | 14 | NA |
| 388 | 37.95 | temperature | 30 | 720 | > th | dose independent | sin | 5 | NA |
| 398 | 37.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 427 | 37.99 | temperature | 25 | 10 | > th | dose dependent | sin | 11 | NA |
| 448 | 38.02 | temperature | 25 | 10 | > th | dose independent | rect. | 17 | 11 |
| 456 | 38.03 | temperature | 25 | 4320 | > th | dose independent | sin | 11 | NA |
| 478 | 38.05 | temperature | 25 | 10 | > th | dose independent | rect. | 17 | 9 |
| 485 | 38.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 532 | 38.10 | temperature | 25 | 4320 | < th | dose independent | sin | 11 | NA |
| 612 | 38.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 621 | 38.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 10 |
| 635 | 38.21 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 9 |
| 643 | 38.21 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 691 | 38.24 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 720 | 38.27 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 727 | 38.27 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 23 |
| 753 | 38.29 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 796 | 38.32 | temperature | 10 | 720 | > th | dose dependent | sin | 23 | NA |
| 808 | 38.33 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 917 | 38.43 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 936 | 38.44 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 23 |
| 964 | 38.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 988 | 38.49 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 2 |