Os09g0565400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipoprotein, type 6 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0565400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Lipoprotein, type 6 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.68 | 0.186 | 11.1 | 0.596 | 0.435 | -0.404 | -0.024 | 1.39 | 0.0571 | 9 | 26.5 | 916 | -- | -- |
| 17.31 | 0.194 | 11.2 | 0.325 | 0.493 | -0.292 | -0.184 | -- | -0.0413 | 8.81 | 26.5 | 1138 | -- | -- |
| 15.68 | 0.184 | 11.1 | 0.6 | 0.435 | -0.404 | -- | 1.41 | 0.0583 | 9 | 26.51 | 916 | -- | -- |
| 17.27 | 0.194 | 11.2 | 0.261 | 0.491 | -0.309 | -- | -- | -0.0416 | 8.84 | 26.6 | 1039 | -- | -- |
| 22.11 | 0.219 | 11.1 | 0.649 | -- | -0.627 | -- | 1.26 | 0.139 | -- | 26.02 | 725 | -- | -- |
| 19.54 | 0.207 | 11.2 | 0.178 | 0.562 | -- | -0.202 | -- | -0.119 | 9.16 | -- | -- | -- | -- |
| 19.69 | 0.208 | 11.2 | 0.171 | 0.563 | -- | -- | -- | -0.119 | 9.15 | -- | -- | -- | -- |
| 24.12 | 0.229 | 11.2 | 0.338 | -- | -0.549 | -- | -- | 0.0409 | -- | 26.01 | 696 | -- | -- |
| 18.96 | 0.203 | 11.2 | -- | 0.488 | -0.231 | -- | -- | -0.0829 | 8.86 | 26.54 | 943 | -- | -- |
| 38 | 0.288 | 11.2 | 0.17 | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
| 20.46 | 0.212 | 11.2 | -- | 0.563 | -- | -- | -- | -0.138 | 9.13 | -- | -- | -- | -- |
| 26.99 | 0.242 | 11.2 | -- | -- | -0.492 | -- | -- | -0.00742 | -- | 25.85 | 691 | -- | -- |
| 38.76 | 0.291 | 11.2 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.56 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 2 | 15.63 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 3 | 15.63 | wind | 7.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 5 | 15.71 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 6 | 15.71 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 10 | 15.75 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 13 | 15.79 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 14 | 15.81 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 29 | 15.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 30 | 15.91 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 32 | 15.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 33 | 15.92 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 34 | 15.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 37 | 15.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 41 | 15.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 43 | 15.94 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 44 | 15.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 47 | 15.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 49 | 15.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 54 | 15.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 55 | 15.94 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 75 | 15.97 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 85 | 15.99 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 89 | 16.00 | temperature | 25.0 | 270 | < th | dose independent | rect. | 4 | 20 |
| 95 | 16.02 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 99 | 16.03 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 104 | 16.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 107 | 16.05 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 112 | 16.07 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 113 | 16.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 20 |
| 117 | 16.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 121 | 16.10 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 135 | 16.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 136 | 16.14 | temperature | 25.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 150 | 16.16 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 151 | 16.16 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 154 | 16.16 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 158 | 16.16 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 167 | 16.16 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 168 | 16.16 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 190 | 16.16 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 196 | 16.16 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 232 | 16.18 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 244 | 16.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 247 | 16.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 251 | 16.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 260 | 16.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 261 | 16.20 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 271 | 16.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 317 | 16.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 21 |
| 325 | 16.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 327 | 16.27 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 372 | 16.30 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 393 | 16.33 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 399 | 16.33 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 427 | 16.34 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 431 | 16.34 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 20 |
| 447 | 16.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 450 | 16.36 | wind | 5.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 507 | 16.38 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 593 | 16.41 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 597 | 16.42 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 613 | 16.44 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 651 | 16.45 | wind | 7.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 728 | 16.49 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 733 | 16.50 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 18 |
| 765 | 16.51 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 775 | 16.51 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 814 | 16.55 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 827 | 16.56 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 837 | 16.57 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 905 | 16.58 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 924 | 16.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 950 | 16.60 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 969 | 16.61 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 970 | 16.61 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 988 | 16.62 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 17 |