Os09g0556800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0556800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.21 | 0.477 | 3.1 | -1.52 | 0.343 | 1.22 | 0.0738 | -8.05 | 0.235 | 8.47 | 30.7 | 4312 | -- | -- |
| 107.49 | 0.483 | 2.96 | -0.288 | 0.349 | 0.244 | 0.129 | -- | 0.112 | 8.86 | 28.5 | 6994 | -- | -- |
| 103.22 | 0.473 | 3.1 | -1.51 | 0.343 | 1.22 | -- | -8.02 | 0.235 | 8.48 | 30.72 | 4309 | -- | -- |
| 107.08 | 0.482 | 2.97 | -0.286 | 0.318 | 0.228 | -- | -- | 0.135 | 8.65 | 28.5 | 5758 | -- | -- |
| 109.81 | 0.488 | 3.1 | -1.5 | -- | 1.21 | -- | -7.96 | 0.237 | -- | 30.7 | 4309 | -- | -- |
| 109.66 | 0.491 | 2.97 | -0.194 | 0.336 | -- | 0.0255 | -- | 0.169 | 8.45 | -- | -- | -- | -- |
| 109.67 | 0.49 | 2.97 | -0.193 | 0.336 | -- | -- | -- | 0.169 | 8.46 | -- | -- | -- | -- |
| 113.34 | 0.496 | 2.98 | -0.283 | -- | 0.226 | -- | -- | 0.129 | -- | 28.5 | 5760 | -- | -- |
| 108.85 | 0.486 | 2.96 | -- | 0.331 | 0.184 | -- | -- | 0.19 | 8.7 | 29.1 | 5761 | -- | -- |
| 115.98 | 0.503 | 2.97 | -0.192 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 110.65 | 0.492 | 2.96 | -- | 0.335 | -- | -- | -- | 0.191 | 8.5 | -- | -- | -- | -- |
| 114.09 | 0.497 | 2.96 | -- | -- | 0.18 | -- | -- | 0.217 | -- | 30.6 | 5738 | -- | -- |
| 116.95 | 0.505 | 2.97 | -- | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.63 | wind | 3.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 3 | 98.93 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 4 | 98.94 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 5 | 98.94 | radiation | 20.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 7 | 98.96 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 8 | 99.00 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 10 | 99.05 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 12 | 99.06 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 14 | 99.06 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 99.07 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 18 | 99.07 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 21 | 99.07 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 22 | 99.07 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 30 | 99.13 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 33 | 99.14 | humidity | 70.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 36 | 99.16 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 38 | 99.19 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 42 | 99.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 44 | 99.21 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 45 | 99.21 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 47 | 99.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 48 | 99.21 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 51 | 99.21 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 52 | 99.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 53 | 99.21 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 57 | 99.25 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 58 | 99.25 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 60 | 99.30 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 62 | 99.31 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 67 | 99.38 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 72 | 99.48 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 83 | 99.64 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 107 | 100.01 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 109 | 100.02 | radiation | 20.0 | 10 | < th | dose independent | rect. | 8 | 4 |
| 112 | 100.06 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 23 |
| 113 | 100.06 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 114 | 100.17 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 117 | 100.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 126 | 100.56 | radiation | 30.0 | 90 | < th | dose independent | rect. | 7 | 6 |
| 135 | 100.89 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 137 | 100.94 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 156 | 101.54 | wind | 1.0 | 720 | < th | dose dependent | rect. | 24 | 2 |
| 157 | 101.61 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 160 | 101.64 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 196 | 102.02 | wind | 1.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 197 | 102.02 | radiation | 30.0 | 90 | < th | dose independent | rect. | 7 | 18 |
| 204 | 102.11 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 205 | 102.14 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 207 | 102.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 213 | 102.34 | radiation | 30.0 | 90 | < th | dose independent | rect. | 10 | 15 |
| 215 | 102.41 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 221 | 102.46 | radiation | 30.0 | 90 | < th | dose independent | rect. | 21 | 16 |
| 226 | 102.51 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 231 | 102.54 | wind | 1.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 238 | 102.57 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 272 | 102.68 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 294 | 102.74 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 297 | 102.78 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 304 | 102.81 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 7 | 6 |
| 318 | 102.90 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 326 | 102.96 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 340 | 103.03 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 357 | 103.14 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 367 | 103.21 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 382 | 103.27 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 393 | 103.34 | humidity | 80.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 413 | 103.39 | wind | 1.0 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 422 | 103.44 | radiation | 30.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 424 | 103.45 | temperature | 30.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 438 | 103.51 | temperature | 30.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 446 | 103.52 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 15 | 22 |
| 447 | 103.52 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 15 | 22 |
| 451 | 103.54 | radiation | 30.0 | 90 | < th | dose independent | rect. | 23 | 14 |
| 465 | 103.58 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 2 |
| 496 | 103.66 | humidity | 80.0 | 10 | < th | dose independent | rect. | 1 | 8 |
| 571 | 103.82 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 5 |
| 625 | 103.87 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 646 | 103.92 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 685 | 104.02 | wind | 1.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 702 | 104.06 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 707 | 104.07 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 753 | 104.11 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 780 | 104.15 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 802 | 104.19 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 851 | 104.27 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 893 | 104.29 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 8 | 17 |
| 901 | 104.31 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 10 |
| 903 | 104.31 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 19 |
| 920 | 104.32 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 925 | 104.32 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 16 |