Os09g0555300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0555300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.64 | 0.36 | 10.6 | 0.893 | 0.88 | 0.582 | 0.106 | 3.87 | -0.0208 | 3.86 | 9.746 | 490 | -- | -- |
| 62.95 | 0.37 | 10.6 | 0.313 | 0.906 | 0.766 | -0.141 | -- | -0.0456 | 3.97 | 29.29 | 590 | -- | -- |
| 58.67 | 0.357 | 10.6 | 0.883 | 0.877 | 0.58 | -- | 3.8 | -0.0232 | 3.86 | 10.15 | 499 | -- | -- |
| 63.04 | 0.37 | 10.6 | 0.304 | 0.904 | 0.761 | -- | -- | -0.0481 | 3.96 | 29.3 | 579 | -- | -- |
| 86.4 | 0.433 | 10.6 | 0.903 | -- | 0.723 | -- | 3.34 | -0.0223 | -- | 14.2 | 1160 | -- | -- |
| 73.62 | 0.402 | 10.6 | 0.389 | 0.743 | -- | -0.385 | -- | -0.0977 | 3.29 | -- | -- | -- | -- |
| 74.09 | 0.403 | 10.6 | 0.397 | 0.74 | -- | -- | -- | -0.0953 | 3.22 | -- | -- | -- | -- |
| 91.15 | 0.445 | 10.6 | 0.276 | -- | 0.592 | -- | -- | 0.00999 | -- | 29.03 | 2617 | -- | -- |
| 64.32 | 0.374 | 10.6 | -- | 0.75 | 0.676 | -- | -- | -0.0424 | 3.5 | 29.15 | 1876 | -- | -- |
| 105.15 | 0.479 | 10.6 | 0.428 | -- | -- | -- | -- | -0.0759 | -- | -- | -- | -- | -- |
| 78.24 | 0.414 | 10.7 | -- | 0.748 | -- | -- | -- | -0.14 | 3.22 | -- | -- | -- | -- |
| 87.62 | 0.436 | 10.7 | -- | -- | 0.781 | -- | -- | -0.204 | -- | 24.4 | 1161 | -- | -- |
| 109.99 | 0.49 | 10.7 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.85 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 17 |
| 2 | 57.03 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 19 |
| 6 | 57.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 10 | 57.64 | humidity | 60 | 270 | > th | dose independent | rect. | 8 | 18 |
| 11 | 57.67 | humidity | 60 | 270 | > th | dose independent | rect. | 7 | 20 |
| 16 | 57.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 22 | 58.05 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 23 | 58.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 32 | 58.29 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 34 | 58.30 | temperature | 25 | 30 | > th | dose independent | rect. | 15 | 18 |
| 36 | 58.33 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 38 | 58.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 69 | 58.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 75 | 58.76 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 83 | 58.81 | wind | 9 | 43200 | < th | dose independent | sin | 10 | NA |
| 84 | 58.81 | wind | 7 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 87 | 58.83 | wind | 9 | 43200 | > th | dose independent | sin | 10 | NA |
| 99 | 58.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 127 | 58.95 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 9 | 19 |
| 157 | 59.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 180 | 59.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 14 |
| 193 | 59.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 21 |
| 205 | 59.11 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 212 | 59.12 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 215 | 59.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 226 | 59.13 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 227 | 59.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 250 | 59.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 259 | 59.16 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 268 | 59.17 | wind | 7 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 310 | 59.22 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 369 | 59.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 371 | 59.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 379 | 59.31 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 508 | 59.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 519 | 59.44 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 550 | 59.46 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 7 | 20 |
| 573 | 59.48 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 589 | 59.49 | wind | 7 | 43200 | > th | dose dependent | sin | 10 | NA |
| 602 | 59.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 17 |