Os09g0538600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxisome type ascorbate peroxidase.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0538600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Peroxisome type ascorbate peroxidase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.26 | 0.54 | 8.69 | 0.678 | 1.95 | -0.695 | -0.153 | 0.615 | 0.68 | 20.1 | 68.18 | 1261 | -- | -- |
| 132.99 | 0.537 | 8.7 | 0.606 | 1.95 | -0.66 | -0.0909 | -- | 0.672 | 20.1 | 68 | 1250 | -- | -- |
| 132.33 | 0.536 | 8.69 | 0.68 | 1.95 | -0.695 | -- | 0.595 | 0.679 | 20.1 | 68.21 | 1259 | -- | -- |
| 133.01 | 0.537 | 8.7 | 0.61 | 1.95 | -0.659 | -- | -- | 0.663 | 20.1 | 68.05 | 1250 | -- | -- |
| 332.66 | 0.849 | 8.64 | 0.738 | -- | -0.631 | -- | 0.859 | 0.718 | -- | 70 | 1417 | -- | -- |
| 149.1 | 0.572 | 8.7 | 0.467 | 1.92 | -- | -0.131 | -- | 0.659 | 19.8 | -- | -- | -- | -- |
| 149.15 | 0.572 | 8.7 | 0.471 | 1.92 | -- | -- | -- | 0.659 | 19.8 | -- | -- | -- | -- |
| 334.19 | 0.851 | 8.64 | 0.589 | -- | -0.615 | -- | -- | 0.685 | -- | 69.35 | 1398 | -- | -- |
| 142.72 | 0.556 | 8.71 | -- | 1.94 | -0.556 | -- | -- | 0.645 | 20.1 | 68.02 | 1250 | -- | -- |
| 349.47 | 0.874 | 8.66 | 0.448 | -- | -- | -- | -- | 0.633 | -- | -- | -- | -- | -- |
| 154.99 | 0.582 | 8.72 | -- | 1.92 | -- | -- | -- | 0.607 | 19.9 | -- | -- | -- | -- |
| 343.32 | 0.863 | 8.65 | -- | -- | -0.553 | -- | -- | 0.688 | -- | 72.27 | 1421 | -- | -- |
| 354.77 | 0.879 | 8.67 | -- | -- | -- | -- | -- | 0.583 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.71 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 3 | 131.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 4 | 131.03 | humidity | 90 | 720 | < th | dose independent | rect. | 20 | 3 |
| 5 | 131.09 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 8 |
| 12 | 131.41 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 33 | 132.04 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 35 | 132.10 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 38 | 132.18 | temperature | 30 | 10 | < th | dose independent | rect. | 5 | 20 |
| 44 | 132.38 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 13 |
| 46 | 132.39 | temperature | 15 | 270 | > th | dose dependent | sin | 3 | NA |
| 48 | 132.44 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 9 |
| 61 | 132.60 | humidity | 60 | 1440 | > th | dose dependent | rect. | 2 | 14 |
| 62 | 132.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 67 | 132.71 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 74 | 132.76 | humidity | 50 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 75 | 132.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 14 |
| 95 | 132.89 | temperature | 20 | 90 | > th | dose dependent | sin | 1 | NA |
| 129 | 133.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 130 | 133.05 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 138 | 133.07 | humidity | 60 | 720 | > th | dose dependent | sin | 15 | NA |
| 150 | 133.11 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 17 |
| 157 | 133.17 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 14 |
| 158 | 133.17 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 18 |
| 182 | 133.28 | temperature | 15 | 10 | > th | dose independent | rect. | 5 | 20 |
| 183 | 133.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 190 | 133.30 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 4 |
| 203 | 133.36 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 218 | 133.44 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 229 | 133.47 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 5 |
| 242 | 133.51 | humidity | 60 | 1440 | > th | dose dependent | sin | 3 | NA |
| 252 | 133.53 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 309 | 133.66 | temperature | 20 | 10 | > th | dose dependent | sin | 23 | NA |
| 341 | 133.77 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 13 |
| 361 | 133.84 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 388 | 133.91 | temperature | 30 | 10 | < th | dose independent | rect. | 5 | 8 |
| 399 | 133.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 417 | 133.97 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 428 | 133.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 430 | 133.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 459 | 134.07 | humidity | 90 | 720 | > th | dose independent | rect. | 22 | 1 |
| 468 | 134.09 | humidity | 90 | 720 | < th | dose independent | rect. | 11 | 13 |
| 497 | 134.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 4 | 21 |
| 513 | 134.17 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 532 | 134.21 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 536 | 134.22 | radiation | 1 | 10 | < th | dose independent | rect. | 1 | 13 |
| 595 | 134.32 | humidity | 90 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 638 | 134.40 | radiation | 1 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 647 | 134.42 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 653 | 134.43 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 693 | 134.50 | radiation | 1 | 10 | < th | dose independent | rect. | 1 | 7 |
| 706 | 134.51 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 764 | 134.60 | wind | 1 | 270 | < th | dose independent | rect. | 11 | 17 |
| 772 | 134.61 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 786 | 134.63 | radiation | 1 | 30 | < th | dose dependent | rect. | 1 | 17 |
| 805 | 134.67 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 1 | 4 |
| 807 | 134.67 | wind | 1 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 831 | 134.71 | radiation | 1 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 838 | 134.72 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 22 | 6 |
| 850 | 134.74 | wind | 1 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 859 | 134.75 | radiation | 1 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 882 | 134.78 | radiation | 1 | 10 | < th | dose independent | rect. | 1 | 5 |
| 892 | 134.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 922 | 134.84 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 928 | 134.85 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 6 |
| 994 | 134.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 996 | 134.95 | humidity | 90 | 30 | > th | dose independent | rect. | 24 | 4 |
| 998 | 134.95 | wind | 1 | 270 | < th | dose dependent | rect. | 23 | 3 |