Os09g0535900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ki1 protein.
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Os09g0535900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ki1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.48 | 0.549 | 12.8 | -3.41 | 2.67 | 2.7 | -1.81 | -3.94 | -0.0791 | 13.8 | 20.38 | 717 | -- | -- |
| 145.88 | 0.563 | 12.7 | -2.64 | 2.69 | 2.72 | -1.59 | -- | 0.132 | 13.9 | 17.99 | 689 | -- | -- |
| 148.85 | 0.568 | 12.8 | -3.35 | 2.68 | 2.64 | -- | -3.42 | -0.0549 | 13.9 | 20.52 | 719 | -- | -- |
| 154.62 | 0.579 | 12.7 | -2.68 | 2.92 | 2.46 | -- | -- | 0.131 | 14.4 | 17.99 | 908 | -- | -- |
| 286.69 | 0.789 | 12.8 | -3.51 | -- | 4.25 | -- | -3.6 | -0.268 | -- | 20.09 | 101 | -- | -- |
| 265.92 | 0.764 | 12.6 | -1.89 | 2.71 | -- | -1.39 | -- | 0.617 | 15 | -- | -- | -- | -- |
| 272.36 | 0.773 | 12.6 | -1.92 | 2.71 | -- | -- | -- | 0.609 | 15 | -- | -- | -- | -- |
| 307.45 | 0.817 | 12.8 | -2.97 | -- | 4.36 | -- | -- | -0.128 | -- | 17.87 | 122 | -- | -- |
| 314.35 | 0.826 | 12.6 | -- | 2.89 | 1.5 | -- | -- | 0.61 | 14.5 | 21.8 | 896 | -- | -- |
| 692.38 | 1.23 | 12.6 | -2.03 | -- | -- | -- | -- | 0.538 | -- | -- | -- | -- | -- |
| 369.29 | 0.899 | 12.5 | -- | 2.75 | -- | -- | -- | 0.822 | 15 | -- | -- | -- | -- |
| 519.17 | 1.06 | 12.7 | -- | -- | 3.35 | -- | -- | 0.303 | -- | 20.31 | 120 | -- | -- |
| 801.42 | 1.32 | 12.6 | -- | -- | -- | -- | -- | 0.764 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 127.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 6 | 127.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 19 | 128.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 42 | 130.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 45 | 130.54 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 123 | 133.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 142 | 134.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 157 | 135.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 177 | 135.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 194 | 136.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 197 | 136.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 231 | 136.42 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 254 | 136.61 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 311 | 137.11 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 313 | 137.12 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 331 | 137.23 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 345 | 137.31 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 400 | 137.78 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 406 | 137.81 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 428 | 137.97 | wind | 5 | 43200 | < th | dose independent | sin | 22 | NA |
| 513 | 138.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 519 | 138.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 551 | 138.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 554 | 138.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 558 | 138.75 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 564 | 138.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 586 | 138.90 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 689 | 139.51 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 700 | 139.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 722 | 139.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 911 | 140.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 16 |