Os09g0534200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ER lumen protein retaining receptor family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0534200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ER lumen protein retaining receptor family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.43 | 0.19 | 11.5 | -0.139 | 0.393 | 0.659 | -0.425 | -0.42 | 0.0202 | 2.33 | 21.3 | 1329 | -- | -- |
| 16.89 | 0.191 | 11.5 | -0.0472 | 0.411 | 0.672 | -0.393 | -- | 0.0349 | 2.19 | 21.3 | 1348 | -- | -- |
| 17.07 | 0.192 | 11.5 | -0.142 | 0.39 | 0.659 | -- | -0.481 | 0.0186 | 2.39 | 21.3 | 1298 | -- | -- |
| 17.59 | 0.195 | 11.5 | -0.031 | 0.392 | 0.702 | -- | -- | 0.0404 | 2.35 | 21.32 | 1328 | -- | -- |
| 24.93 | 0.233 | 11.5 | -0.152 | -- | 0.691 | -- | -0.558 | 0.0144 | -- | 21.3 | 1117 | -- | -- |
| 30.42 | 0.259 | 11.5 | 0.246 | 0.435 | -- | -0.542 | -- | 0.234 | 2.28 | -- | -- | -- | -- |
| 31.5 | 0.263 | 11.5 | 0.261 | 0.434 | -- | -- | -- | 0.237 | 2.29 | -- | -- | -- | -- |
| 25.7 | 0.236 | 11.5 | -0.0116 | -- | 0.729 | -- | -- | 0.0436 | -- | 21.3 | 1110 | -- | -- |
| 17.6 | 0.195 | 11.5 | -- | 0.394 | 0.693 | -- | -- | 0.0453 | 2.32 | 21.3 | 1328 | -- | -- |
| 42.68 | 0.305 | 11.5 | 0.28 | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
| 33.3 | 0.27 | 11.5 | -- | 0.439 | -- | -- | -- | 0.208 | 2.31 | -- | -- | -- | -- |
| 25.7 | 0.236 | 11.5 | -- | -- | 0.726 | -- | -- | 0.0455 | -- | 21.31 | 1115 | -- | -- |
| 44.74 | 0.312 | 11.5 | -- | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 3 | 16.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 4 | 16.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 26 | 16.94 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 49 | 17.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 62 | 17.04 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 79 | 17.07 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 96 | 17.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 164 | 17.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 240 | 17.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 328 | 17.35 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 402 | 17.44 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 424 | 17.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 468 | 17.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 490 | 17.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 524 | 17.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 530 | 17.54 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 612 | 17.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 625 | 17.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 744 | 17.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 768 | 17.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 871 | 17.82 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 894 | 17.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |