BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0534200 Os09g0534200|J065218H20
         (104 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75760.1  | chr1:28446940-28448421 REVERSE LENGTH=273          169   4e-43
AT4G38790.1  | chr4:18111426-18112977 FORWARD LENGTH=274          166   2e-42
AT1G19970.1  | chr1:6931194-6932597 REVERSE LENGTH=273            164   6e-42
AT2G21190.1  | chr2:9080916-9082642 FORWARD LENGTH=270            159   2e-40
AT3G25160.1  | chr3:9160337-9162023 REVERSE LENGTH=273            124   1e-29

>AT1G75760.1 | chr1:28446940-28448421 REVERSE LENGTH=273
          Length = 272

 Score =  169 bits (427), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/101 (83%), Positives = 89/101 (88%), Gaps = 1/101 (0%)

Query: 5   LTAGAKFPE-HVFHLLQIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL 63
           L A +  P+  V    +IVEPFTAHYVFALG+ARFLSCAHWVLQVLDTRGRLLTALGYG 
Sbjct: 172 LEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDTRGRLLTALGYGF 231

Query: 64  WPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 104
           WP MVLLSEIVQTFILADFCYYYVKSL+GGQLVLRLPSGVV
Sbjct: 232 WPIMVLLSEIVQTFILADFCYYYVKSLMGGQLVLRLPSGVV 272



>AT4G38790.1 | chr4:18111426-18112977 FORWARD LENGTH=274
          Length = 273

 Score =  166 bits (421), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 89/101 (88%), Gaps = 1/101 (0%)

Query: 5   LTAGAKFPE-HVFHLLQIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL 63
           L A +  P+  V    +IVEPFTAHYVFALGVARFLSCAHWVLQV+DTRGRLL ALGYGL
Sbjct: 173 LEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVVDTRGRLLVALGYGL 232

Query: 64  WPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 104
           WPSMVL+SEIVQTFILADFCYYYVKS+ GGQLVLRLPSGVV
Sbjct: 233 WPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 273



>AT1G19970.1 | chr1:6931194-6932597 REVERSE LENGTH=273
          Length = 272

 Score =  164 bits (416), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 81/101 (80%), Positives = 89/101 (88%), Gaps = 1/101 (0%)

Query: 5   LTAGAKFPE-HVFHLLQIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL 63
           L A +  P+  V    +IVEPFTAHYVFALG+ARFLSCAHW+LQVLDTRGRLLTALG GL
Sbjct: 172 LEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWILQVLDTRGRLLTALGSGL 231

Query: 64  WPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 104
           WP MVL+SEIVQTFILADFCYYYV+SL+GGQLVLRLPSGVV
Sbjct: 232 WPVMVLISEIVQTFILADFCYYYVQSLMGGQLVLRLPSGVV 272



>AT2G21190.1 | chr2:9080916-9082642 FORWARD LENGTH=270
          Length = 269

 Score =  159 bits (403), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 86/101 (85%), Gaps = 1/101 (0%)

Query: 5   LTAGAKFPE-HVFHLLQIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGL 63
           L A +  P+  V    +IVEPFTAHYVFALGVARF SCAHWVLQ++DT GRLL  LGYGL
Sbjct: 169 LEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLVVLGYGL 228

Query: 64  WPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 104
           WPSMV++SEIVQTFILADFCYYYVKS+ GGQLVLRLPSGVV
Sbjct: 229 WPSMVIISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 269



>AT3G25160.1 | chr3:9160337-9162023 REVERSE LENGTH=273
          Length = 272

 Score =  124 bits (311), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 71/82 (86%), Gaps = 1/82 (1%)

Query: 20  QIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYG-LWPSMVLLSEIVQTFI 78
           QI+EPFTAHYVFALG+ARFL+CAHW++QV++TRG  L  LG G  W  + LL+EIVQTFI
Sbjct: 190 QIIEPFTAHYVFALGIARFLACAHWIIQVVETRGHYLWLLGAGYFWFPVALLAEIVQTFI 249

Query: 79  LADFCYYYVKSLVGGQLVLRLP 100
           LADFCYYYVKS++ GQLVL++P
Sbjct: 250 LADFCYYYVKSVMEGQLVLKMP 271



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.332    0.144    0.462 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,029,561
Number of extensions: 64234
Number of successful extensions: 198
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 197
Number of HSP's successfully gapped: 5
Length of query: 104
Length of database: 11,106,569
Length adjustment: 74
Effective length of query: 30
Effective length of database: 9,077,785
Effective search space: 272333550
Effective search space used: 272333550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 104 (44.7 bits)