Os09g0528300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0528300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 393.25 | 0.932 | 3.08 | 0.237 | 0.149 | 0.54 | 0.0931 | 2.04 | -0.273 | 8.7 | 71 | 3412 | -- | -- |
| 399.19 | 0.931 | 3.1 | 0.215 | 0.107 | 0.776 | -0.105 | -- | -0.235 | 8.7 | 71 | 3064 | -- | -- |
| 393.27 | 0.924 | 3.08 | 0.241 | 0.15 | 0.539 | -- | 2.02 | -0.271 | 8.73 | 71 | 3417 | -- | -- |
| 399.22 | 0.931 | 3.1 | 0.21 | 0.106 | 0.78 | -- | -- | -0.233 | 8.65 | 70.98 | 3064 | -- | -- |
| 394.47 | 0.925 | 3.09 | 0.244 | -- | 0.504 | -- | 2.07 | -0.274 | -- | 70.55 | 3385 | -- | -- |
| 411.85 | 0.951 | 3.12 | 0.303 | 0.091 | -- | -0.166 | -- | -0.358 | 8.34 | -- | -- | -- | -- |
| 411.93 | 0.95 | 3.12 | 0.298 | 0.0909 | -- | -- | -- | -0.358 | 8.65 | -- | -- | -- | -- |
| 399.84 | 0.931 | 3.1 | 0.21 | -- | 0.778 | -- | -- | -0.233 | -- | 71 | 3048 | -- | -- |
| 400.34 | 0.932 | 3.1 | -- | 0.105 | 0.808 | -- | -- | -0.249 | 8.56 | 70.69 | 3064 | -- | -- |
| 412.4 | 0.949 | 3.13 | 0.298 | -- | -- | -- | -- | -0.357 | -- | -- | -- | -- | -- |
| 414.28 | 0.952 | 3.13 | -- | 0.092 | -- | -- | -- | -0.391 | 8.41 | -- | -- | -- | -- |
| 400.95 | 0.933 | 3.1 | -- | -- | 0.808 | -- | -- | -0.253 | -- | 71 | 2988 | -- | -- |
| 414.75 | 0.951 | 3.13 | -- | -- | -- | -- | -- | -0.39 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 380.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 4 | 6 |
| 2 | 380.52 | humidity | 70.0 | 720 | > th | dose independent | rect. | 20 | 14 |
| 11 | 383.62 | humidity | 70.0 | 720 | > th | dose independent | sin | 9 | NA |
| 22 | 385.79 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 26 | 385.94 | wind | 5.0 | 10 | > th | dose independent | rect. | 18 | 2 |
| 30 | 386.11 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 16 |
| 34 | 386.64 | humidity | 70.0 | 720 | < th | dose independent | sin | 9 | NA |
| 37 | 386.97 | humidity | 70.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 39 | 387.34 | humidity | 70.0 | 720 | > th | dose independent | rect. | 23 | 11 |
| 40 | 387.38 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 44 | 387.53 | humidity | 70.0 | 720 | < th | dose independent | rect. | 8 | 3 |
| 79 | 388.39 | humidity | 70.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 99 | 389.48 | wind | 3.0 | 10 | > th | dose dependent | rect. | 18 | 2 |
| 105 | 389.60 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 107 | 389.62 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 135 | 390.27 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 155 | 390.70 | humidity | 70.0 | 720 | > th | dose independent | rect. | 1 | 9 |
| 172 | 391.13 | radiation | 10.0 | 10 | < th | dose independent | rect. | 17 | 21 |
| 177 | 391.26 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 8 | 3 |
| 178 | 391.33 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 202 | 392.14 | wind | 5.0 | 10 | < th | dose independent | rect. | 14 | 13 |
| 203 | 392.14 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 19 |
| 207 | 392.14 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 228 | 392.38 | wind | 9.0 | 30 | > th | dose dependent | rect. | 10 | 2 |
| 252 | 392.42 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 9 |
| 274 | 392.42 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 346 | 393.07 | radiation | 10.0 | 10 | > th | dose independent | rect. | 14 | 23 |
| 394 | 393.71 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 399 | 393.73 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 433 | 394.08 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 436 | 394.11 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 437 | 394.12 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 468 | 394.40 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 11 |
| 474 | 394.43 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 484 | 394.43 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 498 | 394.46 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 15 |
| 501 | 394.46 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 509 | 394.50 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 20 |
| 511 | 394.53 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 516 | 394.57 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 519 | 394.59 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 13 |
| 525 | 394.59 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 529 | 394.62 | humidity | 70.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 572 | 394.65 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 609 | 394.97 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 644 | 395.14 | humidity | 70.0 | 720 | > th | dose independent | rect. | 4 | 22 |
| 690 | 395.48 | wind | 9.0 | 30 | > th | dose independent | rect. | 10 | 2 |
| 730 | 395.63 | wind | 9.0 | 90 | < th | dose dependent | rect. | 14 | 12 |
| 748 | 395.75 | wind | 9.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 749 | 395.76 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 11 |
| 767 | 395.81 | radiation | 10.0 | 10 | < th | dose independent | rect. | 10 | 22 |
| 779 | 395.86 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 785 | 395.91 | wind | 9.0 | 10 | < th | dose dependent | rect. | 14 | 13 |
| 870 | 396.13 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 4 |
| 873 | 396.13 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 4 |
| 893 | 396.21 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 19 |
| 925 | 396.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 952 | 396.43 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 984 | 396.55 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |