Os09g0525700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0525700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.9 | 0.49 | 6.46 | -1.44 | 1.37 | 0.306 | 0.962 | 3.24 | -0.297 | 10.4 | 28.82 | 166 | -- | -- |
| 114.05 | 0.497 | 6.42 | -0.998 | 1.3 | 0.588 | 0.981 | -- | -0.232 | 10.2 | 29.93 | 224 | -- | -- |
| 112.57 | 0.494 | 6.46 | -1.39 | 1.34 | 0.315 | -- | 3.39 | -0.293 | 10.4 | 29.07 | 209 | -- | -- |
| 115.62 | 0.501 | 6.43 | -0.915 | 1.31 | 0.772 | -- | -- | -0.256 | 10.4 | 29.95 | 228 | -- | -- |
| 184.81 | 0.633 | 6.45 | -1.09 | -- | 1.23 | -- | 1.97 | -0.223 | -- | 27.6 | 798 | -- | -- |
| 126.31 | 0.527 | 6.42 | -1.07 | 1.4 | -- | 0.992 | -- | -0.225 | 9.62 | -- | -- | -- | -- |
| 129.97 | 0.534 | 6.42 | -1.04 | 1.39 | -- | -- | -- | -0.222 | 9.67 | -- | -- | -- | -- |
| 182.55 | 0.629 | 6.4 | -0.785 | -- | 1.36 | -- | -- | -0.0584 | -- | 28.2 | 829 | -- | -- |
| 137.52 | 0.546 | 6.41 | -- | 1.31 | 0.921 | -- | -- | -0.169 | 10.6 | 30 | 228 | -- | -- |
| 244.51 | 0.731 | 6.45 | -1.05 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 158.26 | 0.588 | 6.39 | -- | 1.39 | -- | -- | -- | -0.107 | 9.73 | -- | -- | -- | -- |
| 181.48 | 0.627 | 6.32 | -- | -- | 1.42 | -- | -- | 0.355 | -- | 25.5 | 791 | -- | -- |
| 273.48 | 0.772 | 6.43 | -- | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 4 | 102.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 8 | 103.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 18 | 104.68 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 21 | 104.70 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 27 | 105.00 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 30 | 105.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 60 | 105.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 18 |
| 68 | 106.20 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 5 |
| 92 | 106.83 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 99 | 106.97 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 100 | 106.99 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 115 | 107.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 118 | 107.20 | humidity | 80.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 129 | 107.34 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 19 |
| 161 | 107.74 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 163 | 107.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 190 | 107.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 14 |
| 201 | 108.08 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 204 | 108.09 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 207 | 108.13 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 219 | 108.23 | humidity | 60.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 249 | 108.44 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 253 | 108.46 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 311 | 108.82 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 320 | 108.86 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 330 | 108.93 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 342 | 108.98 | wind | 9.0 | 10 | < th | dose dependent | rect. | 15 | 14 |
| 392 | 109.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 396 | 109.25 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 400 | 109.27 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 401 | 109.27 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 403 | 109.27 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 404 | 109.27 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 407 | 109.27 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 408 | 109.27 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 410 | 109.27 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 415 | 109.27 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 416 | 109.27 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 435 | 109.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 451 | 109.41 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 454 | 109.44 | humidity | 60.0 | 30 | > th | dose independent | rect. | 5 | 19 |
| 466 | 109.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 13 | 16 |
| 467 | 109.49 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 3 |
| 468 | 109.49 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 477 | 109.54 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 483 | 109.57 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 5 |
| 485 | 109.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 21 |
| 487 | 109.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 488 | 109.59 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 10 |
| 494 | 109.60 | wind | 3.0 | 30 | < th | dose dependent | rect. | 22 | 7 |
| 500 | 109.63 | wind | 7.0 | 10 | < th | dose independent | rect. | 15 | 14 |
| 506 | 109.65 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 10 |
| 507 | 109.66 | temperature | 15.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 535 | 109.75 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 551 | 109.82 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 554 | 109.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 556 | 109.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 9 |
| 565 | 109.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 9 |
| 582 | 109.92 | wind | 9.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 584 | 109.92 | temperature | 10.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 585 | 109.92 | temperature | 30.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 586 | 109.92 | humidity | 50.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 589 | 109.92 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 590 | 109.92 | radiation | 1.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 597 | 109.93 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 617 | 110.00 | temperature | 25.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 626 | 110.03 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 14 |
| 631 | 110.06 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 24 | 5 |
| 633 | 110.06 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 683 | 110.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 22 |
| 687 | 110.17 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 722 | 110.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 19 |
| 724 | 110.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 731 | 110.25 | radiation | 1.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 733 | 110.25 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 21 |
| 756 | 110.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 794 | 110.39 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 801 | 110.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 821 | 110.46 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 824 | 110.47 | temperature | 25.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 826 | 110.47 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 2 | 8 |
| 849 | 110.53 | wind | 3.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 857 | 110.54 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 860 | 110.55 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 16 |
| 892 | 110.64 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 902 | 110.66 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 940 | 110.73 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 18 |
| 943 | 110.74 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 959 | 110.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 962 | 110.78 | temperature | 25.0 | 4320 | < th | dose independent | sin | 11 | NA |