Os09g0520200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os09g0520200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.68 | 0.285 | 9.6 | -0.604 | 1.04 | -0.904 | -0.371 | -0.708 | -0.202 | 6.63 | 20.9 | 1295 | -- | -- |
| 36.83 | 0.283 | 9.57 | -0.511 | 1.04 | -0.737 | -0.279 | -- | -0.142 | 6.58 | 21.9 | 1272 | -- | -- |
| 36.84 | 0.283 | 9.59 | -0.63 | 1.04 | -0.824 | -- | -0.574 | -0.187 | 6.69 | 21.3 | 1319 | -- | -- |
| 36.96 | 0.283 | 9.57 | -0.554 | 1.04 | -0.703 | -- | -- | -0.144 | 6.64 | 22 | 1277 | -- | -- |
| 84.32 | 0.428 | 9.59 | -0.528 | -- | -0.776 | -- | -0.138 | -0.115 | -- | 21.8 | 661 | -- | -- |
| 54.66 | 0.347 | 9.62 | -0.803 | 1.03 | -- | -0.242 | -- | -0.373 | 6.83 | -- | -- | -- | -- |
| 54.81 | 0.347 | 9.62 | -0.807 | 1.03 | -- | -- | -- | -0.372 | 6.85 | -- | -- | -- | -- |
| 62.26 | 0.368 | 9.58 | -0.544 | -- | -0.882 | -- | -- | -0.0743 | -- | 25.8 | 399 | -- | -- |
| 40.63 | 0.297 | 9.54 | -- | 1.09 | -0.881 | -- | -- | -0.0182 | 6.68 | 21.5 | 4035 | -- | -- |
| 110.7 | 0.492 | 9.64 | -0.785 | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
| 71.99 | 0.397 | 9.6 | -- | 1.02 | -- | -- | -- | -0.283 | 6.9 | -- | -- | -- | -- |
| 69.9 | 0.389 | 9.56 | -- | -- | -0.952 | -- | -- | -0.000231 | -- | 25.9 | 431 | -- | -- |
| 126.95 | 0.526 | 9.62 | -- | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 15 | 37.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 17 | 37.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 22 | 37.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 31 | 37.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 57 | 37.75 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 58 | 37.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 62 | 37.76 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 69 | 37.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 78 | 37.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 79 | 37.87 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 89 | 37.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 100 | 37.94 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 108 | 37.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 112 | 37.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 117 | 37.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 118 | 37.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 124 | 37.99 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 155 | 38.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 188 | 38.05 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 206 | 38.07 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 219 | 38.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 233 | 38.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 242 | 38.10 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 336 | 38.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 12 |
| 344 | 38.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 359 | 38.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 392 | 38.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 420 | 38.24 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 421 | 38.24 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 450 | 38.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 485 | 38.28 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 490 | 38.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 598 | 38.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 629 | 38.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 645 | 38.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 751 | 38.46 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 758 | 38.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 792 | 38.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 859 | 38.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 862 | 38.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 918 | 38.57 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |