Os09g0519100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to BHLH transcription factor (Fragment).
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Os09g0519100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to BHLH transcription factor (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.75 | 0.503 | 9.98 | -0.0256 | 1.51 | -1.17 | 0.783 | 0.42 | -0.328 | 7 | 22.1 | 1461 | -- | -- |
| 115.24 | 0.5 | 9.99 | -0.134 | 1.51 | -1.19 | 0.82 | -- | -0.346 | 6.91 | 22.12 | 1421 | -- | -- |
| 116.3 | 0.502 | 9.98 | -0.00506 | 1.51 | -1.17 | -- | 0.443 | -0.328 | 7.04 | 22.14 | 1441 | -- | -- |
| 116.76 | 0.503 | 9.99 | -0.144 | 1.51 | -1.18 | -- | -- | -0.357 | 7.05 | 22.1 | 1452 | -- | -- |
| 178.15 | 0.622 | 9.97 | 0.0617 | -- | -1.38 | -- | 0.768 | -0.101 | -- | 25.21 | 453 | -- | -- |
| 165.39 | 0.603 | 10.1 | -0.593 | 1.49 | -- | 0.731 | -- | -0.748 | 7.1 | -- | -- | -- | -- |
| 166.76 | 0.605 | 10.1 | -0.578 | 1.49 | -- | -- | -- | -0.75 | 7.16 | -- | -- | -- | -- |
| 178.51 | 0.622 | 9.99 | -0.173 | -- | -1.36 | -- | -- | -0.178 | -- | 25.25 | 470 | -- | -- |
| 117.31 | 0.504 | 9.99 | -- | 1.5 | -1.19 | -- | -- | -0.353 | 7.07 | 22.15 | 1460 | -- | -- |
| 283.6 | 0.787 | 10.1 | -0.55 | -- | -- | -- | -- | -0.723 | -- | -- | -- | -- | -- |
| 175.56 | 0.62 | 10.1 | -- | 1.48 | -- | -- | -- | -0.685 | 7.19 | -- | -- | -- | -- |
| 179.27 | 0.624 | 9.98 | -- | -- | -1.38 | -- | -- | -0.151 | -- | 25.26 | 471 | -- | -- |
| 291.58 | 0.797 | 10.1 | -- | -- | -- | -- | -- | -0.662 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.29 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 2 | 114.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 8 | 116.16 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 10 | 116.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 11 | 116.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 13 | 116.74 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 27 | 116.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 96 | 117.68 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 178 | 118.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 187 | 118.23 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 208 | 118.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 216 | 118.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 217 | 118.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 232 | 118.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 247 | 118.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 265 | 118.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 272 | 118.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 278 | 118.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 295 | 118.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 387 | 118.95 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 425 | 119.06 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 517 | 119.32 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 550 | 119.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 598 | 119.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 632 | 119.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 687 | 119.73 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 778 | 119.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 875 | 120.22 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |