Os09g0517700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioesterase superfamily domain containing protein.
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Os09g0517700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Thioesterase superfamily domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.59 | 0.26 | 10.9 | 0.276 | 0.648 | -0.665 | -0.321 | 0.996 | 0.168 | 1.3 | 24.56 | 1013 | -- | -- |
| 31.13 | 0.26 | 11 | 0.125 | 0.646 | -0.538 | -0.258 | -- | 0.107 | 1.47 | 24.9 | 1047 | -- | -- |
| 30.96 | 0.259 | 10.9 | 0.245 | 0.645 | -0.653 | -- | 0.811 | 0.152 | 1.31 | 24.84 | 1018 | -- | -- |
| 31.16 | 0.26 | 11 | 0.0708 | 0.638 | -0.566 | -- | -- | 0.107 | 1.41 | 24.7 | 1036 | -- | -- |
| 42.39 | 0.305 | 11 | 0.0889 | -- | -0.81 | -- | 0.45 | 0.136 | -- | 24.84 | 1018 | -- | -- |
| 39.74 | 0.296 | 11 | -0.101 | 0.531 | -- | -0.362 | -- | 0.0469 | 1.96 | -- | -- | -- | -- |
| 40.24 | 0.297 | 11 | -0.0899 | 0.531 | -- | -- | -- | 0.049 | 1.96 | -- | -- | -- | -- |
| 42.29 | 0.304 | 11 | 0.0382 | -- | -0.778 | -- | -- | 0.127 | -- | 24.7 | 1036 | -- | -- |
| 31.27 | 0.26 | 11 | -- | 0.64 | -0.556 | -- | -- | 0.104 | 1.42 | 24.7 | 1036 | -- | -- |
| 57.23 | 0.353 | 11 | -0.0679 | -- | -- | -- | -- | 0.0614 | -- | -- | -- | -- | -- |
| 40.45 | 0.298 | 11 | -- | 0.529 | -- | -- | -- | 0.059 | 1.96 | -- | -- | -- | -- |
| 42.33 | 0.304 | 11 | -- | -- | -0.773 | -- | -- | 0.122 | -- | 24.7 | 1036 | -- | -- |
| 57.35 | 0.353 | 11 | -- | -- | -- | -- | -- | 0.0689 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.01 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 2 | 30.02 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 4 | 30.18 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 5 | 30.20 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 23 | 30.78 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 26 | 30.80 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 30 | 30.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 31 | 30.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 37 | 30.98 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 38 | 30.98 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 40 | 30.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 43 | 31.01 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 44 | 31.02 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 47 | 31.04 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 50 | 31.05 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 52 | 31.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 20 |
| 59 | 31.08 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 71 | 31.09 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 72 | 31.10 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 83 | 31.11 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 86 | 31.11 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 16 |
| 92 | 31.11 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 142 | 31.15 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 152 | 31.16 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 156 | 31.16 | temperature | 20 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 157 | 31.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 165 | 31.17 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 175 | 31.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 189 | 31.18 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 233 | 31.19 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 235 | 31.19 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 243 | 31.20 | temperature | 20 | 14400 | > th | dose independent | sin | 13 | NA |
| 251 | 31.20 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 320 | 31.23 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 352 | 31.24 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 366 | 31.25 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 508 | 31.30 | radiation | 40 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 543 | 31.32 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 593 | 31.35 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 594 | 31.35 | temperature | 20 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 671 | 31.39 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 688 | 31.40 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 774 | 31.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 785 | 31.45 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 803 | 31.45 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 832 | 31.47 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 871 | 31.48 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 886 | 31.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 890 | 31.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 952 | 31.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 5 |