Os09g0514700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0514700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.07 | 0.29 | 9.18 | 1.57 | 1.11 | 0.699 | 0.0313 | 0.192 | 0.631 | 18.6 | 72.42 | 830 | -- | -- |
| 38.11 | 0.288 | 9.18 | 1.58 | 1.09 | 0.706 | -0.0507 | -- | 0.634 | 18.6 | 72.9 | 844 | -- | -- |
| 38.05 | 0.287 | 9.18 | 1.57 | 1.1 | 0.705 | -- | 0.202 | 0.634 | 18.6 | 73 | 838 | -- | -- |
| 38.11 | 0.288 | 9.18 | 1.58 | 1.09 | 0.709 | -- | -- | 0.635 | 18.6 | 73 | 843 | -- | -- |
| 80.87 | 0.419 | 9.14 | 1.47 | -- | 0.545 | -- | 0.228 | 0.657 | -- | 70.19 | 2686 | -- | -- |
| 45.49 | 0.316 | 9.18 | 1.59 | 0.885 | -- | -0.0374 | -- | 0.569 | 17.7 | -- | -- | -- | -- |
| 45.49 | 0.316 | 9.18 | 1.59 | 0.885 | -- | -- | -- | 0.568 | 17.7 | -- | -- | -- | -- |
| 80.41 | 0.418 | 9.14 | 1.53 | -- | 0.602 | -- | -- | 0.667 | -- | 71.1 | 2718 | -- | -- |
| 98.88 | 0.463 | 9.16 | -- | 0.93 | 1.02 | -- | -- | 0.66 | 18.2 | 83.79 | 2409 | -- | -- |
| 86.14 | 0.434 | 9.17 | 1.57 | -- | -- | -- | -- | 0.547 | -- | -- | -- | -- | -- |
| 112.54 | 0.496 | 9.22 | -- | 0.86 | -- | -- | -- | 0.391 | 17.7 | -- | -- | -- | -- |
| 138.35 | 0.548 | 9.16 | -- | -- | 0.91 | -- | -- | 0.612 | -- | 81 | 2692 | -- | -- |
| 150.89 | 0.573 | 9.21 | -- | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 37.10 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 3 | 37.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 4 | 37.98 | humidity | 80.0 | 720 | < th | dose independent | rect. | 10 | 21 |
| 5 | 37.98 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 6 | 38.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 7 | 38.00 | humidity | 80.0 | 720 | < th | dose independent | rect. | 10 | 19 |
| 8 | 38.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 9 | 38.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 12 | 38.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 13 | 38.06 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 17 | 38.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 20 | 38.13 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 22 | 38.13 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 26 | 38.15 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 29 | 38.16 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 30 | 38.16 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 39 | 38.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 43 | 38.24 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 18 |
| 50 | 38.27 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 23 |
| 63 | 38.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 64 | 38.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 67 | 38.33 | humidity | 80.0 | 720 | > th | dose independent | rect. | 22 | 23 |
| 68 | 38.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 70 | 38.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 71 | 38.33 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 72 | 38.34 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 76 | 38.35 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 89 | 38.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 91 | 38.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 94 | 38.40 | humidity | 80.0 | 720 | > th | dose independent | no | NA | NA |
| 114 | 38.44 | humidity | 80.0 | 720 | > th | dose independent | rect. | 2 | 23 |
| 125 | 38.46 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 137 | 38.48 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 154 | 38.52 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 23 |
| 162 | 38.53 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 186 | 38.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 11 |
| 187 | 38.57 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 199 | 38.58 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 23 |
| 223 | 38.61 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 233 | 38.62 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 240 | 38.63 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 241 | 38.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 19 |
| 255 | 38.65 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 15 |
| 259 | 38.66 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 266 | 38.67 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 276 | 38.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 279 | 38.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 286 | 38.68 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 296 | 38.70 | humidity | 80.0 | 720 | < th | dose independent | no | NA | NA |
| 298 | 38.70 | humidity | 80.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 314 | 38.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 323 | 38.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 334 | 38.73 | humidity | 70.0 | 720 | > th | dose dependent | no | NA | NA |
| 344 | 38.74 | humidity | 80.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 358 | 38.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 14 |
| 385 | 38.77 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 394 | 38.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 416 | 38.80 | humidity | 80.0 | 720 | < th | dose independent | rect. | 14 | 23 |
| 441 | 38.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 451 | 38.84 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 618 | 38.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 699 | 39.00 | humidity | 80.0 | 720 | < th | dose independent | sin | 18 | NA |
| 765 | 39.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 870 | 39.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 20 |
| 934 | 39.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 935 | 39.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 950 | 39.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 968 | 39.17 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |