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Os09g0514600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Adrenodoxin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.0103) R2 : 0.077
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.134 (0.0217) R2dN8 : 0.0995 R2N8 : 0.077
σ : 0.194
deviance : 17.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.7 0.167 13.7 -0.19 0.304 0.599 0.128 0.37 0.122 20.1 0.5532 799 -- --
12.79 0.167 13.7 -0.202 0.299 0.603 -0.0226 -- 0.125 20.2 1.08 804 -- --
12.72 0.166 13.7 -0.191 0.304 0.595 -- 0.229 0.125 20.2 0.5923 796 -- --
12.78 0.166 13.7 -0.189 0.293 0.575 -- -- 0.13 20.4 1.02 809 -- --
13.01 0.168 13.7 -0.189 -- 0.386 -- 0.415 0.106 -- 0.4186 1851 -- --
13.25 0.171 13.7 -0.232 0.219 -- 0.0994 -- 0.104 3.67 -- -- -- --
13.28 0.171 13.7 -0.234 0.22 -- -- -- 0.103 3.63 -- -- -- --
13.01 0.168 13.7 -0.177 -- 0.38 -- -- 0.14 -- 0.7785 1860 -- --
13.59 0.172 13.7 -- 0.288 0.592 -- -- 0.133 20.3 3.199e-05 804 -- --
15.96 0.187 13.7 -0.224 -- -- -- -- 0.109 -- -- -- -- --
14.72 0.179 13.7 -- 0.215 -- -- -- 0.129 3.64 -- -- -- --
13.79 0.173 13.7 -- -- 0.382 -- -- 0.145 -- 0.5665 1857 -- --
17.29 0.194 13.7 -- -- -- -- -- 0.134 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.31 radiation 1.0 720 < th dose independent rect. 21 9
2 12.33 radiation 1.0 720 < th dose dependent rect. 21 9
3 12.34 radiation 1.0 720 < th dose dependent rect. 3 10
4 12.35 temperature 25.0 10 > th dose dependent rect. 6 1
9 12.36 radiation 1.0 720 < th dose dependent rect. 3 7
11 12.37 temperature 25.0 30 > th dose dependent rect. 4 3
18 12.41 radiation 1.0 720 < th dose independent rect. 3 4
19 12.41 radiation 1.0 720 < th dose independent rect. 3 10
21 12.42 atmosphere 1010.0 30 < th dose independent rect. 6 1
25 12.43 radiation 1.0 720 < th dose independent rect. 3 7
31 12.45 radiation 10.0 30 < th dose independent rect. 6 1
32 12.45 radiation 1.0 720 > th dose independent rect. 5 6
45 12.45 radiation 1.0 720 < th dose dependent rect. 21 16
63 12.47 humidity 90.0 14400 < th dose dependent rect. 1 2
71 12.48 temperature 25.0 90 > th dose independent rect. 5 2
73 12.48 humidity 90.0 14400 < th dose dependent rect. 24 4
75 12.48 humidity 90.0 14400 < th dose dependent rect. 23 6
87 12.50 radiation 1.0 720 < th dose independent rect. 21 16
88 12.50 wind 9.0 4320 > th dose dependent rect. 13 1
100 12.51 radiation 1.0 90 < th dose dependent rect. 3 22
103 12.52 radiation 1.0 720 < th dose independent rect. 21 13
106 12.52 wind 1.0 30 > th dose dependent rect. 6 1
107 12.52 temperature 25.0 10 > th dose dependent rect. 2 5
111 12.53 radiation 1.0 720 > th dose independent sin 9 NA
124 12.54 radiation 1.0 720 < th dose independent sin 9 NA
129 12.54 atmosphere 1010.0 30 < th dose dependent rect. 6 1
130 12.54 radiation 1.0 10 > th dose dependent rect. 6 1
142 12.55 radiation 1.0 720 < th dose dependent sin 4 NA
149 12.56 humidity 80.0 4320 > th dose independent rect. 23 1
150 12.56 radiation 20.0 14400 > th dose independent rect. 16 1
154 12.56 radiation 1.0 90 < th dose independent rect. 3 21
158 12.56 humidity 90.0 30 < th dose dependent rect. 6 1
189 12.57 radiation 1.0 720 < th dose dependent rect. 19 18
193 12.58 radiation 1.0 720 < th dose independent rect. 19 18
200 12.58 wind 1.0 43200 < th dose dependent rect. 6 2
209 12.58 wind 7.0 270 < th dose dependent rect. 22 20
215 12.59 wind 9.0 4320 > th dose independent rect. 13 1
216 12.59 humidity 60.0 14400 < th dose independent rect. 16 1
217 12.59 radiation 20.0 4320 < th dose independent rect. 10 1
222 12.59 humidity 80.0 14400 > th dose independent rect. 19 8
236 12.59 radiation 1.0 720 < th dose dependent rect. 19 14
240 12.60 radiation 40.0 14400 > th dose independent rect. 14 1
241 12.60 humidity 80.0 4320 < th dose independent rect. 22 2
244 12.60 humidity 80.0 14400 > th dose independent rect. 19 4
248 12.60 humidity 80.0 14400 > th dose independent rect. 19 6
264 12.60 radiation 1.0 720 < th dose independent rect. 19 15
271 12.60 wind 1.0 270 < th dose dependent sin 20 NA
281 12.61 wind 1.0 43200 < th dose independent rect. 6 1
282 12.61 wind 7.0 4320 < th dose independent rect. 13 1
286 12.61 humidity 80.0 14400 < th dose independent rect. 19 4
291 12.61 temperature 25.0 90 > th dose independent rect. 24 7
298 12.61 radiation 1.0 720 < th dose independent rect. 19 12
303 12.61 radiation 10.0 43200 > th dose independent rect. 14 17
305 12.61 temperature 30.0 90 < th dose independent rect. 3 21
307 12.61 wind 1.0 43200 < th dose dependent rect. 22 1
323 12.62 radiation 10.0 43200 > th dose independent sin 14 NA
327 12.62 humidity 60.0 14400 > th dose independent rect. 16 1
342 12.62 radiation 20.0 4320 < th dose dependent rect. 10 1
358 12.63 humidity 80.0 14400 > th dose independent rect. 20 2
366 12.63 radiation 10.0 43200 > th dose independent rect. 13 5
369 12.63 precipitation 0.1 43200 > th dose independent rect. 22 6
370 12.63 precipitation 0.1 43200 < th dose independent rect. 22 6
390 12.63 wind 5.0 270 < th dose independent rect. 22 20
393 12.63 wind 3.0 270 < th dose dependent rect. 11 3
395 12.63 precipitation 0.1 43200 > th dose dependent rect. 22 6
396 12.63 precipitation 0.1 43200 < th dose dependent rect. 22 6
410 12.64 radiation 20.0 4320 > th dose independent rect. 10 2
412 12.64 radiation 10.0 43200 > th dose independent rect. 14 3
420 12.64 humidity 80.0 14400 < th dose independent rect. 21 6
445 12.64 wind 9.0 30 < th dose independent rect. 7 23
447 12.64 radiation 20.0 30 < th dose dependent rect. 6 1
455 12.64 radiation 1.0 720 < th dose dependent rect. 1 23
458 12.65 wind 9.0 1440 < th dose independent rect. 7 1
459 12.65 temperature 10.0 1440 > th dose independent rect. 7 1
463 12.65 temperature 30.0 1440 < th dose independent rect. 7 1
467 12.65 humidity 50.0 1440 > th dose independent rect. 7 1
472 12.65 atmosphere 995.0 1440 > th dose independent rect. 7 1
473 12.65 atmosphere 1015.0 1440 < th dose independent rect. 7 1
487 12.65 precipitation 0.1 43200 > th dose independent rect. 6 13
490 12.65 precipitation 0.1 43200 < th dose independent rect. 6 14
498 12.65 radiation 1.0 720 > th dose independent rect. 14 22
499 12.65 temperature 10.0 1440 > th dose independent rect. 8 23
503 12.65 wind 9.0 4320 < th dose dependent rect. 13 1
504 12.65 wind 1.0 4320 < th dose dependent rect. 22 1
517 12.65 precipitation 0.1 43200 < th dose dependent rect. 6 14
526 12.66 radiation 40.0 14400 > th dose independent rect. 12 1
527 12.66 radiation 20.0 14400 > th dose independent rect. 13 1
528 12.66 radiation 40.0 14400 < th dose independent rect. 12 1
529 12.66 wind 1.0 43200 > th dose independent rect. 6 2
531 12.66 temperature 25.0 720 < th dose independent rect. 3 4
545 12.66 temperature 30.0 30 < th dose independent rect. 12 12
547 12.66 wind 7.0 720 < th dose independent rect. 14 13
554 12.66 wind 3.0 90 < th dose independent rect. 23 16
559 12.66 precipitation 0.1 43200 > th dose independent rect. 11 21
560 12.66 precipitation 0.1 43200 < th dose independent rect. 11 21
564 12.66 precipitation 0.1 43200 > th dose independent rect. 5 23
565 12.66 precipitation 0.1 43200 < th dose independent rect. 5 23
569 12.66 radiation 10.0 43200 < th dose dependent rect. 15 1
581 12.66 radiation 1.0 720 < th dose dependent rect. 3 20
584 12.66 wind 1.0 270 < th dose dependent rect. 6 21
585 12.66 precipitation 0.1 43200 < th dose dependent rect. 11 21
589 12.66 precipitation 0.1 43200 < th dose dependent rect. 5 23
590 12.67 humidity 80.0 30 > th dose independent rect. 6 1
591 12.67 humidity 90.0 30 < th dose independent rect. 6 1
592 12.67 atmosphere 1000.0 30 > th dose independent rect. 6 1
597 12.67 precipitation 0.1 43200 > th dose independent rect. 1 3
617 12.67 precipitation 0.1 43200 > th dose independent rect. 15 17
618 12.67 precipitation 0.1 43200 < th dose independent rect. 15 17
622 12.67 precipitation 0.1 43200 > th dose independent rect. 5 19
624 12.67 precipitation 0.1 43200 < th dose independent rect. 5 19
628 12.67 radiation 1.0 720 > th dose independent rect. 15 20
635 12.67 precipitation 0.1 43200 > th dose independent rect. 21 22
637 12.67 radiation 1.0 720 < th dose independent rect. 1 23
649 12.67 precipitation 0.1 43200 > th dose dependent rect. 1 3
653 12.67 atmosphere 1005.0 10 > th dose dependent rect. 24 4
659 12.67 precipitation 0.1 43200 > th dose dependent rect. 5 14
661 12.67 precipitation 0.1 43200 < th dose dependent rect. 15 17
666 12.67 precipitation 0.1 43200 < th dose dependent rect. 5 19
673 12.67 precipitation 0.1 43200 > th dose dependent rect. 21 21
678 12.68 radiation 40.0 14400 > th dose independent sin 14 NA
680 12.68 precipitation 0.1 43200 > th dose independent no NA NA
681 12.68 precipitation 0.1 43200 < th dose independent no NA NA
682 12.68 wind 5.0 30 < th dose independent rect. 6 1
685 12.68 temperature 10.0 30 > th dose independent rect. 6 1
687 12.68 temperature 30.0 30 < th dose independent rect. 6 1
688 12.68 humidity 50.0 30 > th dose independent rect. 6 1
695 12.68 radiation 1.0 30 > th dose independent rect. 6 1
701 12.68 precipitation 0.1 30 < th dose independent rect. 6 1
702 12.68 wind 1.0 43200 > th dose independent rect. 21 2
703 12.68 wind 7.0 720 < th dose independent rect. 15 2
706 12.68 precipitation 0.1 43200 < th dose independent rect. 22 2
709 12.68 radiation 40.0 14400 > th dose independent rect. 12 3
710 12.68 precipitation 0.1 43200 < th dose independent rect. 1 3
711 12.68 wind 7.0 720 < th dose independent rect. 14 4
732 12.68 wind 7.0 720 < th dose independent rect. 15 11
776 12.68 wind 1.0 30 < th dose independent rect. 6 21
779 12.68 precipitation 0.1 43200 > th dose independent rect. 3 21
782 12.68 precipitation 0.1 43200 > th dose independent rect. 15 21
784 12.68 precipitation 0.1 43200 < th dose independent rect. 3 21
787 12.68 precipitation 0.1 43200 < th dose independent rect. 15 21
789 12.68 wind 1.0 270 > th dose independent rect. 1 22
804 12.68 precipitation 0.1 43200 < th dose independent rect. 20 22
807 12.68 temperature 10.0 30 > th dose independent rect. 7 23
828 12.68 precipitation 0.1 43200 < th dose dependent no NA NA
830 12.68 precipitation 0.1 30 < th dose dependent rect. 6 1
836 12.68 precipitation 0.1 43200 < th dose dependent rect. 22 2
839 12.68 atmosphere 1000.0 90 > th dose dependent rect. 24 3
840 12.68 precipitation 0.1 43200 < th dose dependent rect. 1 3
845 12.68 wind 1.0 90 < th dose dependent rect. 9 6
850 12.68 radiation 10.0 43200 < th dose dependent rect. 9 10
854 12.68 precipitation 0.1 43200 > th dose dependent rect. 6 12
870 12.68 precipitation 0.1 43200 > th dose dependent rect. 24 19
878 12.68 precipitation 0.1 43200 < th dose dependent rect. 3 21
881 12.68 precipitation 0.1 43200 < th dose dependent rect. 15 21
892 12.68 precipitation 0.1 43200 < th dose dependent rect. 20 22
907 12.69 wind 1.0 30 > th dose independent rect. 6 1
909 12.69 wind 9.0 14400 > th dose independent rect. 15 1
910 12.69 wind 1.0 30 < th dose independent rect. 6 1
911 12.69 wind 1.0 43200 < th dose independent rect. 22 1
919 12.69 precipitation 0.1 43200 > th dose independent rect. 23 2
928 12.69 wind 7.0 4320 > th dose independent rect. 13 5
929 12.69 wind 7.0 4320 < th dose independent rect. 13 5
978 12.69 wind 7.0 720 < th dose independent rect. 14 21