Os09g0506900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0506900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.01 | 0.274 | 9.8 | -1.18 | 0.56 | -0.681 | 0.503 | -0.478 | -0.112 | 4.67 | 21.1 | 5481 | -- | -- |
| 34.29 | 0.273 | 9.82 | -1.19 | 0.555 | -0.535 | 0.497 | -- | -0.136 | 4.64 | 22.09 | 5388 | -- | -- |
| 34.63 | 0.274 | 9.8 | -1.18 | 0.57 | -0.689 | -- | -0.49 | -0.113 | 4.82 | 21.1 | 5329 | -- | -- |
| 34.77 | 0.275 | 9.82 | -1.16 | 0.566 | -0.515 | -- | -- | -0.143 | 4.86 | 22.5 | 5333 | -- | -- |
| 51.33 | 0.334 | 9.81 | -1.1 | -- | -0.539 | -- | -0.262 | -0.107 | -- | 22.4 | 5420 | -- | -- |
| 41.99 | 0.304 | 9.77 | -0.879 | 0.575 | -- | 0.49 | -- | 0.0657 | 4.55 | -- | -- | -- | -- |
| 42.61 | 0.306 | 9.77 | -0.882 | 0.58 | -- | -- | -- | 0.0631 | 4.68 | -- | -- | -- | -- |
| 51.4 | 0.334 | 9.83 | -1.17 | -- | -0.543 | -- | -- | -0.145 | -- | 22.4 | 5420 | -- | -- |
| 62.53 | 0.368 | 9.76 | -- | 0.552 | -0.126 | -- | -- | 0.128 | 4.85 | 25.89 | 2627 | -- | -- |
| 60.48 | 0.363 | 9.78 | -0.86 | -- | -- | -- | -- | 0.0783 | -- | -- | -- | -- | -- |
| 63.12 | 0.372 | 9.75 | -- | 0.564 | -- | -- | -- | 0.161 | 4.73 | -- | -- | -- | -- |
| 74.79 | 0.403 | 9.73 | -- | -- | 0.326 | -- | -- | 0.221 | -- | 28.2 | 416 | -- | -- |
| 79.99 | 0.417 | 9.76 | -- | -- | -- | -- | -- | 0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 2 | 32.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 4 | 32.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 6 | 32.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 8 | 32.63 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 30 | 32.75 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 34 | 32.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 36 | 32.80 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 37 | 32.81 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 43 | 32.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 44 | 32.83 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 49 | 32.83 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 51 | 32.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 55 | 32.83 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 60 | 32.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 61 | 32.84 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 73 | 32.85 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 76 | 32.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 78 | 32.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 94 | 32.87 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 101 | 32.88 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 102 | 32.88 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 104 | 32.88 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 113 | 32.90 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 115 | 32.91 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 163 | 32.95 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 173 | 32.96 | radiation | 1.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 206 | 32.97 | radiation | 1.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 208 | 32.97 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 211 | 32.97 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 213 | 32.97 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 215 | 32.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 274 | 32.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 22 |
| 288 | 32.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 298 | 32.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 304 | 32.98 | radiation | 1.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 308 | 32.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 314 | 32.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 316 | 32.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 325 | 32.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 387 | 32.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 392 | 32.99 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 393 | 32.99 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 444 | 33.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 446 | 33.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 453 | 33.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 480 | 33.01 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 482 | 33.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 503 | 33.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 509 | 33.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 12 | 14 |
| 523 | 33.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 527 | 33.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 572 | 33.03 | radiation | 1.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 578 | 33.03 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 622 | 33.04 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 656 | 33.05 | atmosphere | 1015.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 727 | 33.07 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 728 | 33.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 729 | 33.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 731 | 33.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 750 | 33.07 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 752 | 33.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 758 | 33.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 759 | 33.08 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 818 | 33.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 864 | 33.12 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 898 | 33.12 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 909 | 33.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 939 | 33.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 942 | 33.14 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 969 | 33.14 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |