Os09g0493600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to IojAP protein-like (Expressed protein).
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Os09g0493600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to IojAP protein-like (Expressed protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.52 | 0.383 | 12.8 | -0.349 | 1.59 | -1.93 | -1.72 | -0.656 | -0.688 | 16.2 | 3.341 | 321 | 20.6 | -- |
| 66.9 | 0.381 | 12.8 | -0.308 | 1.61 | -1.89 | -1.6 | -- | -0.682 | 16.1 | 4.008 | 321 | 20.8 | -- |
| 71.37 | 0.393 | 12.8 | -0.289 | 1.75 | -1.7 | -- | 0.832 | -0.693 | 16.3 | 6.911 | 287 | 20.7 | -- |
| 72.21 | 0.396 | 12.8 | -0.293 | 1.76 | -1.7 | -- | -- | -0.697 | 16.3 | 6.713 | 293 | 20.6 | -- |
| 84.37 | 0.428 | 12.8 | -0.305 | -- | -2.82 | -- | 1.35 | -0.766 | -- | 6.255 | 338 | 0.754 | -- |
| 105.37 | 0.481 | 12.8 | -0.246 | 2.55 | -- | -1.09 | -- | -0.673 | 16.8 | -- | -- | -- | -- |
| 108.45 | 0.488 | 12.8 | -0.25 | 2.55 | -- | -- | -- | -0.678 | 16.9 | -- | -- | -- | -- |
| 81.6 | 0.421 | 12.8 | -0.272 | -- | -2.59 | -- | -- | -0.729 | -- | 10.34 | 360 | 1.83 | -- |
| 73.97 | 0.401 | 12.8 | -- | 1.75 | -1.67 | -- | -- | -0.662 | 16.1 | 9.891 | 287 | 20.9 | -- |
| 450.55 | 0.992 | 12.8 | -0.344 | -- | -- | -- | -- | -0.744 | -- | -- | -- | -- | -- |
| 110.1 | 0.491 | 12.8 | -- | 2.55 | -- | -- | -- | -0.65 | 16.9 | -- | -- | -- | -- |
| 81.16 | 0.42 | 12.8 | -- | -- | -2.63 | -- | -- | -0.638 | -- | 10 | 383 | 2.28 | -- |
| 453.68 | 0.994 | 12.8 | -- | -- | -- | -- | -- | -0.706 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.24 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 2 | 60.84 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 3 | 60.95 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 6 | 61.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 8 | 61.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 9 | 61.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 11 | 61.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 12 | 61.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 21 | 62.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 22 | 62.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 32 | 62.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 36 | 62.83 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 37 | 62.87 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 39 | 62.94 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 42 | 62.97 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 47 | 63.16 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 48 | 63.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 49 | 63.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 51 | 63.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 52 | 63.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 54 | 63.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 57 | 63.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 58 | 63.24 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 62 | 63.36 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 82 | 63.83 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 88 | 63.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 89 | 63.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 96 | 64.08 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 97 | 64.09 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 100 | 64.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 101 | 64.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 103 | 64.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 104 | 64.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 107 | 64.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 112 | 64.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 114 | 64.22 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 115 | 64.30 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 167 | 65.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 168 | 65.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 170 | 65.16 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 177 | 65.27 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 187 | 65.29 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 18 |
| 216 | 65.76 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 223 | 65.81 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 241 | 66.00 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 244 | 66.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 245 | 66.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 246 | 66.04 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 249 | 66.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 250 | 66.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 255 | 66.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 256 | 66.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 258 | 66.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 264 | 66.08 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 270 | 66.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 271 | 66.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 6 |
| 272 | 66.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 300 | 66.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 320 | 66.48 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 331 | 66.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 345 | 66.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 361 | 66.98 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 367 | 67.04 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 386 | 67.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 396 | 67.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 14 |
| 397 | 67.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 405 | 67.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 406 | 67.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 407 | 67.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 410 | 67.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 411 | 67.35 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 416 | 67.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 417 | 67.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 418 | 67.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 424 | 67.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 425 | 67.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 4 |
| 427 | 67.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 442 | 67.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 455 | 67.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 490 | 67.64 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 503 | 67.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 514 | 67.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 516 | 67.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 536 | 67.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 537 | 67.79 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 548 | 67.90 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 550 | 67.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 551 | 67.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 558 | 68.00 | radiation | 10.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 565 | 68.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 566 | 68.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 589 | 68.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 590 | 68.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 591 | 68.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 595 | 68.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 607 | 68.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 614 | 68.44 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 631 | 68.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 663 | 68.78 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 765 | 69.10 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 797 | 69.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 18 |
| 799 | 69.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 810 | 69.37 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 817 | 69.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 818 | 69.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 831 | 69.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 837 | 69.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 902 | 69.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 908 | 69.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 6 |
| 920 | 69.82 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 969 | 70.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 971 | 70.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 976 | 70.06 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |