Os09g0482000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UAS domain containing protein.
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Os09g0482000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UAS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.91 | 0.322 | 8.1 | 0.133 | 1.27 | -0.866 | 0.14 | -0.366 | -0.294 | 4.2 | 26.19 | 26 | -- | -- |
| 47.02 | 0.322 | 8.11 | 0.0807 | 1.27 | -0.835 | 0.00709 | -- | -0.305 | 4.17 | 26.39 | 21 | -- | -- |
| 46.86 | 0.321 | 8.1 | 0.131 | 1.27 | -0.853 | -- | -0.315 | -0.293 | 4.17 | 26.22 | 20 | -- | -- |
| 47.02 | 0.321 | 8.11 | 0.0807 | 1.27 | -0.835 | -- | -- | -0.305 | 4.17 | 26.39 | 21 | -- | -- |
| 116.38 | 0.502 | 8.09 | 0.225 | -- | -0.863 | -- | 0.935 | -0.12 | -- | 17.1 | 7 | -- | -- |
| 57.46 | 0.355 | 8.07 | 0.276 | 1.1 | -- | -0.0217 | -- | -0.123 | 4.62 | -- | -- | -- | -- |
| 57.46 | 0.355 | 8.07 | 0.276 | 1.1 | -- | -- | -- | -0.123 | 4.62 | -- | -- | -- | -- |
| 116.37 | 0.502 | 8.08 | 0.217 | -- | -1.28 | -- | -- | -0.12 | -- | 17.08 | 49 | -- | -- |
| 47.17 | 0.322 | 8.11 | -- | 1.28 | -0.865 | -- | -- | -0.32 | 4.16 | 26.39 | 21 | -- | -- |
| 121.84 | 0.516 | 8.08 | 0.318 | -- | -- | -- | -- | -0.0939 | -- | -- | -- | -- | -- |
| 59.46 | 0.361 | 8.07 | -- | 1.11 | -- | -- | -- | -0.153 | 4.61 | -- | -- | -- | -- |
| 115.97 | 0.502 | 8.1 | -- | -- | -1.2 | -- | -- | -0.173 | -- | 18.4 | 1037 | -- | -- |
| 124.51 | 0.521 | 8.08 | -- | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.26 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 6 | 45.51 | temperature | 30.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 7 | 45.58 | temperature | 10.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 42 | 47.00 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 44 | 47.06 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 48 | 47.13 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 77 | 47.47 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 78 | 47.47 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 89 | 47.52 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 93 | 47.54 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 95 | 47.55 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 110 | 47.59 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 113 | 47.59 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 120 | 47.61 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 131 | 47.66 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 147 | 47.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 168 | 47.87 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 196 | 47.96 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 216 | 48.16 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 218 | 48.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 18 |
| 224 | 48.26 | temperature | 25.0 | 30 | < th | dose independent | sin | 8 | NA |
| 258 | 48.43 | temperature | 25.0 | 30 | < th | dose independent | rect. | 22 | 21 |
| 265 | 48.45 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 8 |
| 266 | 48.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 288 | 48.53 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 308 | 48.58 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 22 | 16 |
| 332 | 48.67 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 333 | 48.67 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 334 | 48.67 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 337 | 48.67 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 20 | 18 |
| 355 | 48.71 | temperature | 25.0 | 30 | > th | dose independent | sin | 8 | NA |
| 468 | 48.91 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 486 | 48.94 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 2 | 16 |
| 498 | 48.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 517 | 49.02 | temperature | 25.0 | 30 | < th | dose independent | rect. | 22 | 16 |
| 523 | 49.03 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 542 | 49.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 567 | 49.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 19 |
| 572 | 49.12 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 592 | 49.15 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 629 | 49.20 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 655 | 49.24 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 689 | 49.28 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 2 | 16 |
| 699 | 49.29 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 20 | 22 |
| 702 | 49.29 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 20 | 22 |
| 712 | 49.31 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 22 |
| 715 | 49.31 | wind | 1.0 | 90 | > th | dose dependent | rect. | 1 | 17 |
| 778 | 49.40 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 18 | 18 |
| 791 | 49.43 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 813 | 49.45 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 852 | 49.48 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 7 |
| 860 | 49.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 864 | 49.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 879 | 49.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 948 | 49.59 | temperature | 25.0 | 30 | < th | dose independent | rect. | 20 | 23 |
| 956 | 49.60 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 961 | 49.60 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 973 | 49.61 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 1 | NA |
| 978 | 49.62 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 980 | 49.62 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 987 | 49.62 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 23 |