Os09g0479800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pyrophosphate-dependent phosphofructo-1-kinase-like protein.
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Os09g0479800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pyrophosphate-dependent phosphofructo-1-kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.22 | 0.609 | 2.59 | -0.337 | 0.0358 | -28.8 | -0.759 | -134 | 0.182 | 5.3 | 8.578 | 104 | 6.35 | -- |
| 223.78 | 0.702 | 2.81 | 0.313 | 0.0744 | 0.597 | -0.233 | -- | 0.136 | 19 | 8.578 | 104 | 6.35 | -- |
| 165.64 | 0.604 | 2.34 | -1.6 | 0.0296 | -109 | -- | -504 | 0.168 | 0.0758 | 8.572 | 105 | 6.32 | -- |
| 215.55 | 0.684 | 2.8 | 0.312 | 0.052 | 1.85 | -- | -- | 0.114 | 19.3 | 8.09 | 75 | 6.68 | -- |
| 165.69 | 0.603 | 2.34 | -1.6 | -- | -109 | -- | -504 | 0.168 | -- | 8.572 | 105 | 6.32 | -- |
| 224.22 | 0.702 | 2.81 | 0.302 | 0.0831 | -- | -0.271 | -- | 0.132 | 19.1 | -- | -- | -- | -- |
| 224.42 | 0.702 | 2.81 | 0.307 | 0.0824 | -- | -- | -- | 0.131 | 19.2 | -- | -- | -- | -- |
| 213.89 | 0.681 | 2.8 | 0.414 | -- | 2.39 | -- | -- | 0.162 | -- | 8.2 | 75 | 8.89 | -- |
| 217.97 | 0.688 | 2.82 | -- | 0.0408 | 2.19 | -- | -- | 0.119 | 23.4 | 8.2 | 75 | 8.52 | -- |
| 224.78 | 0.701 | 2.81 | 0.305 | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
| 226.9 | 0.705 | 2.82 | -- | 0.0795 | -- | -- | -- | 0.0969 | 19.5 | -- | -- | -- | -- |
| 218.04 | 0.688 | 2.82 | -- | -- | 2.19 | -- | -- | 0.119 | -- | 8.2 | 75 | 8.44 | -- |
| 227.24 | 0.704 | 2.82 | -- | -- | -- | -- | -- | 0.0958 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.99 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 164.99 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 12 | 167.50 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 10 |
| 75 | 170.55 | wind | 9 | 90 | > th | dose independent | sin | 12 | NA |
| 76 | 170.64 | wind | 9 | 90 | < th | dose independent | sin | 12 | NA |
| 82 | 172.87 | wind | 9 | 90 | > th | dose dependent | sin | 12 | NA |
| 84 | 174.18 | wind | 9 | 90 | > th | dose independent | rect. | 12 | 7 |
| 154 | 178.03 | wind | 9 | 90 | > th | dose dependent | rect. | 12 | 6 |
| 266 | 185.06 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 1 |
| 605 | 198.82 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 631 | 199.68 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 699 | 200.97 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 701 | 200.99 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 4 |
| 776 | 202.93 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 809 | 203.19 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 925 | 205.07 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 17 | 1 |