Os09g0474100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to TA1 protein (Fragment).
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Os09g0474100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to TA1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.61 | 0.487 | 6.44 | -0.0123 | 0.645 | 0.499 | 0.231 | 1.94 | 0.49 | 12 | 0.00664 | 4839 | -- | -- |
| 110.51 | 0.49 | 6.47 | 0.000527 | 0.636 | 0.796 | 0.231 | -- | 0.507 | 11.9 | 0.3296 | 5018 | -- | -- |
| 107.83 | 0.484 | 6.44 | -0.00362 | 0.645 | 0.492 | -- | 1.96 | 0.489 | 12 | -4.893e-07 | 4839 | -- | -- |
| 110.73 | 0.49 | 6.47 | 0.00108 | 0.639 | 0.796 | -- | -- | 0.506 | 12 | 0.3275 | 5018 | -- | -- |
| 131.7 | 0.535 | 6.46 | -0.0244 | -- | 0.294 | -- | 2.36 | 0.485 | -- | -0.04464 | 6903 | -- | -- |
| 124.12 | 0.522 | 6.49 | 0.248 | 0.626 | -- | 0.112 | -- | 0.423 | 12 | -- | -- | -- | -- |
| 124.17 | 0.522 | 6.49 | 0.253 | 0.626 | -- | -- | -- | 0.424 | 12 | -- | -- | -- | -- |
| 136.24 | 0.544 | 6.48 | 0.0254 | -- | 0.793 | -- | -- | 0.499 | -- | 0.2244 | 5292 | -- | -- |
| 110.73 | 0.49 | 6.47 | -- | 0.64 | 0.792 | -- | -- | 0.506 | 12 | 0.3246 | 5018 | -- | -- |
| 148.83 | 0.57 | 6.5 | 0.233 | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
| 125.85 | 0.525 | 6.49 | -- | 0.623 | -- | -- | -- | 0.396 | 12 | -- | -- | -- | -- |
| 135.63 | 0.542 | 6.48 | -- | -- | 0.839 | -- | -- | 0.502 | -- | 0.4442 | 2813 | -- | -- |
| 150.27 | 0.572 | 6.51 | -- | -- | -- | -- | -- | 0.389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.14 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 2 | 100.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 3 | 100.20 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 11 | 100.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 17 | 100.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 19 | 101.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 26 | 101.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 45 | 101.50 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 46 | 101.51 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 51 | 101.54 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 59 | 101.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 68 | 101.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 69 | 101.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 76 | 101.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 86 | 101.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 94 | 102.01 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 100 | 102.05 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 102 | 102.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 15 |
| 104 | 102.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 109 | 102.15 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 112 | 102.18 | wind | 3.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 114 | 102.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 15 |
| 116 | 102.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 117 | 102.23 | wind | 3.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 125 | 102.31 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 142 | 102.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 144 | 102.45 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 150 | 102.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 152 | 102.56 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 175 | 102.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 178 | 102.78 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 203 | 102.91 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 210 | 102.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 213 | 102.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 217 | 103.01 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 241 | 103.18 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 276 | 103.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 285 | 103.35 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 296 | 103.40 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 297 | 103.42 | wind | 3.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 301 | 103.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 302 | 103.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 309 | 103.45 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 334 | 103.53 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 339 | 103.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 341 | 103.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 368 | 103.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 371 | 103.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 378 | 103.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 17 |
| 381 | 103.65 | wind | 3.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 385 | 103.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 17 |
| 394 | 103.68 | wind | 3.0 | 43200 | > th | dose independent | no | NA | NA |
| 404 | 103.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 408 | 103.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 413 | 103.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 417 | 103.74 | wind | 3.0 | 43200 | < th | dose independent | no | NA | NA |
| 442 | 103.79 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 450 | 103.80 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 452 | 103.80 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 465 | 103.83 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 466 | 103.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 468 | 103.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 471 | 103.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 476 | 103.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 12 |
| 478 | 103.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 494 | 103.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 546 | 103.94 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 548 | 103.94 | wind | 3.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 549 | 103.94 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 552 | 103.95 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 586 | 103.99 | wind | 5.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 602 | 104.02 | wind | 3.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 605 | 104.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 609 | 104.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 620 | 104.05 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 639 | 104.10 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 640 | 104.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 673 | 104.17 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 686 | 104.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 704 | 104.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 754 | 104.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 898 | 104.55 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 980 | 104.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 992 | 104.71 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |