Os09g0460200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sec23/Sec24 trunk region domain containing protein.
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Os09g0460200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sec23/Sec24 trunk region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.07 | 0.424 | 2.98 | -0.228 | 0.0692 | 9.67 | -0.0372 | -23 | 0.124 | 8.56 | 60 | 272 | 8 | 1 |
| 84.93 | 0.433 | 2.92 | -0.0364 | 0.0809 | 4.51 | 0.0826 | -- | 0.121 | 9.77 | 52.78 | 11 | 7.08 | 4.41 |
| 83.07 | 0.425 | 2.98 | -0.228 | 0.0692 | 9.67 | -- | -23 | 0.124 | 8.56 | 60 | 272 | 8 | 1 |
| 84.95 | 0.432 | 2.92 | -0.0338 | 0.0816 | 4.49 | -- | -- | 0.121 | 9.41 | 53.88 | 11 | 7.07 | 4.41 |
| 83.34 | 0.425 | 2.98 | -0.229 | -- | 9.69 | -- | -23 | 0.125 | -- | 60.03 | 271 | 8 | 0.996 |
| 104.67 | 0.48 | 2.93 | -0.108 | 0.117 | -- | -0.203 | -- | 0.0991 | 8.92 | -- | -- | -- | -- |
| 104.8 | 0.479 | 2.93 | -0.114 | 0.117 | -- | -- | -- | 0.0995 | 9.45 | -- | -- | -- | -- |
| 85.34 | 0.432 | 2.93 | -0.0336 | -- | 4.53 | -- | -- | 0.121 | -- | 53.88 | 11 | 7.07 | 4.41 |
| 84.98 | 0.432 | 2.92 | -- | 0.0815 | 4.5 | -- | -- | 0.125 | 9.44 | 54.63 | 12 | 7.04 | 4.42 |
| 105.6 | 0.48 | 2.93 | -0.115 | -- | -- | -- | -- | 0.0998 | -- | -- | -- | -- | -- |
| 105.14 | 0.48 | 2.92 | -- | 0.117 | -- | -- | -- | 0.112 | 9.53 | -- | -- | -- | -- |
| 85.37 | 0.432 | 2.92 | -- | -- | 4.54 | -- | -- | 0.125 | -- | 53.88 | 11 | 7.07 | 4.41 |
| 105.95 | 0.48 | 2.93 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.07 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 27 | 83.07 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 133 | 84.07 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 136 | 84.72 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 140 | 84.83 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 4 |
| 146 | 84.86 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 148 | 84.86 | humidity | 60 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 151 | 84.88 | humidity | 60 | 10 | < th | dose independent | rect. | 18 | 16 |
| 154 | 84.89 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 219 | 84.90 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 355 | 85.10 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 403 | 85.30 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 427 | 85.38 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 20 |
| 428 | 85.39 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 621 | 87.15 | radiation | 40 | 10 | > th | dose dependent | sin | 11 | NA |
| 817 | 88.69 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 818 | 88.70 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 828 | 88.83 | radiation | 40 | 30 | > th | dose independent | rect. | 14 | 20 |
| 833 | 88.87 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 1 |
| 881 | 89.14 | radiation | 40 | 10 | > th | dose independent | sin | 11 | NA |
| 885 | 89.22 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |