Os09g0459200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0459200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 314.61 | 0.833 | 9.21 | 1 | 0.321 | -1.59 | -0.908 | -0.777 | -1.22 | 2.19 | 21.43 | 1371 | -- | -- |
| 314.02 | 0.825 | 9.2 | 1.09 | 0.409 | -1.44 | -1.01 | -- | -1.2 | 0.956 | 21.43 | 912 | -- | -- |
| 314.86 | 0.826 | 9.26 | 0.89 | 0.327 | -1.46 | -- | -1.08 | -1.25 | 0.834 | 21.5 | 891 | -- | -- |
| 317.96 | 0.83 | 9.2 | 1.12 | 0.421 | -1.43 | -- | -- | -1.22 | 1.03 | 21.48 | 890 | -- | -- |
| 321.87 | 0.836 | 9.21 | 1.08 | -- | -1.58 | -- | -0.768 | -1.21 | -- | 21.4 | 1807 | -- | -- |
| 384.76 | 0.92 | 9.29 | 0.573 | 0.242 | -- | -0.816 | -- | -1.62 | 2.03 | -- | -- | -- | -- |
| 386.91 | 0.921 | 9.28 | 0.596 | 0.262 | -- | -- | -- | -1.61 | 3.28 | -- | -- | -- | -- |
| 322.99 | 0.837 | 9.18 | 1.28 | -- | -1.51 | -- | -- | -1.16 | -- | 21.54 | 1797 | -- | -- |
| 346.07 | 0.866 | 9.23 | -- | 0.409 | -1.11 | -- | -- | -1.35 | 1.01 | 21.9 | 853 | -- | -- |
| 390.78 | 0.924 | 9.28 | 0.607 | -- | -- | -- | -- | -1.61 | -- | -- | -- | -- | -- |
| 396.27 | 0.931 | 9.3 | -- | 0.273 | -- | -- | -- | -1.68 | 3.28 | -- | -- | -- | -- |
| 355.12 | 0.878 | 9.25 | -- | -- | -0.991 | -- | -- | -1.38 | -- | 22 | 780 | -- | -- |
| 400.51 | 0.934 | 9.3 | -- | -- | -- | -- | -- | -1.67 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 309.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 2 | 309.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 3 | 310.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 4 | 310.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 5 | 311.60 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 6 | 311.74 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 8 | 312.82 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 11 | 313.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 12 | 313.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 13 | 313.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 15 | 314.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 17 | 314.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 18 | 314.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 21 | 315.74 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 23 | 316.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 24 | 316.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 25 | 316.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 26 | 316.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 27 | 316.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 31 | 317.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 32 | 317.06 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 36 | 317.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 43 | 318.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 45 | 318.37 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 49 | 318.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 51 | 318.74 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 84 | 320.15 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 87 | 320.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 88 | 320.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 89 | 320.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 94 | 320.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 98 | 320.78 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 99 | 320.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 104 | 321.17 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 108 | 321.23 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 117 | 321.51 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 124 | 321.77 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 126 | 321.79 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 128 | 321.96 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 140 | 322.20 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 141 | 322.22 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 142 | 322.23 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 149 | 322.35 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 152 | 322.46 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 161 | 322.66 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 164 | 322.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 166 | 322.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 167 | 322.76 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 178 | 322.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 194 | 323.17 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 200 | 323.27 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 213 | 323.39 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 238 | 323.79 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 248 | 323.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 253 | 323.89 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 256 | 323.93 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 264 | 323.98 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 269 | 324.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 301 | 324.35 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 324 | 324.61 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 352 | 324.86 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 356 | 324.90 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 363 | 324.94 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 365 | 324.95 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 372 | 325.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 378 | 325.11 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 381 | 325.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 21 |
| 387 | 325.18 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 389 | 325.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 393 | 325.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 396 | 325.24 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 398 | 325.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 399 | 325.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 406 | 325.28 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 407 | 325.28 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 425 | 325.36 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 471 | 325.71 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 486 | 325.77 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 512 | 325.95 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 527 | 326.09 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 547 | 326.20 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 554 | 326.28 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 590 | 326.51 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 593 | 326.53 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 596 | 326.54 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 598 | 326.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 603 | 326.58 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 606 | 326.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 619 | 326.68 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 640 | 326.79 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 653 | 326.85 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 713 | 327.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 754 | 327.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 755 | 327.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 792 | 327.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 793 | 327.46 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 795 | 327.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 825 | 327.60 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 833 | 327.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 19 |
| 838 | 327.65 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 854 | 327.70 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 856 | 327.70 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 866 | 327.73 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 872 | 327.77 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 899 | 327.86 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 914 | 327.93 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 954 | 328.12 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 23 |
| 998 | 328.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |