Os09g0456100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os09g0456100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.6 | 0.816 | 4.29 | -1.72 | 0.649 | 1.96 | -2.08 | -1.91 | -0.3 | 10.7 | 24.57 | 768 | -- | -- |
| 303.11 | 0.811 | 4.26 | -1.42 | 0.672 | 1.91 | -1.92 | -- | -0.248 | 10.7 | 24.56 | 764 | -- | -- |
| 317.16 | 0.829 | 4.22 | -1.33 | 0.599 | 1.76 | -- | 0.673 | -0.116 | 10.9 | 25.5 | 800 | -- | -- |
| 317.23 | 0.83 | 4.23 | -1.45 | 0.613 | 1.81 | -- | -- | -0.144 | 11.1 | 25.5 | 808 | -- | -- |
| 335.24 | 0.853 | 4.22 | -1.31 | -- | 1.51 | -- | 0.296 | -0.0111 | -- | 27.6 | 800 | -- | -- |
| 377.32 | 0.911 | 4.22 | -0.976 | 0.176 | -- | -2.19 | -- | -0.0461 | 11.3 | -- | -- | -- | -- |
| 390.37 | 0.925 | 4.23 | -1.05 | 0.417 | -- | -- | -- | -0.045 | 15.6 | -- | -- | -- | -- |
| 335.37 | 0.853 | 4.22 | -1.36 | -- | 1.55 | -- | -- | -0.0076 | -- | 27.66 | 800 | -- | -- |
| 369.14 | 0.895 | 4.17 | -- | 0.48 | 1.52 | -- | -- | 0.134 | 11.2 | 27.56 | 783 | -- | -- |
| 400.03 | 0.935 | 4.23 | -1.07 | -- | -- | -- | -- | -0.0561 | -- | -- | -- | -- | -- |
| 419.56 | 0.958 | 4.2 | -- | 0.438 | -- | -- | -- | 0.0722 | 15.6 | -- | -- | -- | -- |
| 381.46 | 0.91 | 4.18 | -- | -- | 1.35 | -- | -- | 0.157 | -- | 28.3 | 766 | -- | -- |
| 430.22 | 0.968 | 4.2 | -- | -- | -- | -- | -- | 0.0626 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 297.61 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 2 | 297.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 5 | 298.63 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 8 | 298.83 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 32 | 300.57 | temperature | 25 | 720 | > th | dose dependent | sin | 19 | NA |
| 36 | 300.77 | temperature | 20 | 270 | > th | dose dependent | sin | 16 | NA |
| 67 | 302.02 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 68 | 302.08 | temperature | 25 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 122 | 302.82 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 133 | 303.09 | temperature | 10 | 270 | > th | dose dependent | sin | 16 | NA |
| 146 | 303.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 152 | 303.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 204 | 304.96 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 10 |
| 210 | 305.09 | temperature | 30 | 270 | < th | dose dependent | sin | 17 | NA |
| 237 | 305.69 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 13 |
| 308 | 307.22 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 18 |
| 323 | 307.48 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 23 |
| 326 | 307.53 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 23 |
| 328 | 307.61 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 22 |
| 330 | 307.64 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 23 |
| 337 | 307.73 | temperature | 30 | 720 | < th | dose independent | sin | 19 | NA |
| 341 | 307.76 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 23 |
| 359 | 307.95 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 8 |
| 387 | 308.14 | temperature | 30 | 720 | < th | dose independent | rect. | 12 | 23 |
| 391 | 308.17 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 21 |
| 393 | 308.20 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 23 |
| 396 | 308.21 | temperature | 30 | 720 | > th | dose independent | sin | 19 | NA |
| 428 | 308.43 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 22 |
| 432 | 308.48 | temperature | 30 | 720 | < th | dose independent | rect. | 12 | 8 |
| 439 | 308.55 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |
| 445 | 308.61 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 23 |
| 449 | 308.70 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 23 |
| 477 | 308.96 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 23 |
| 505 | 309.08 | temperature | 30 | 720 | > th | dose independent | no | NA | NA |
| 649 | 309.62 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 23 |
| 696 | 310.06 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 18 |
| 706 | 310.16 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 16 |
| 708 | 310.20 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 23 |
| 855 | 311.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 17 |