Os09g0444700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0444700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Mitochondrial substrate carrier family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.68 | 0.238 | 10.5 | 1.32 | 0.598 | -0.649 | -0.414 | -0.01 | 0.323 | 19.2 | 26.47 | 89 | -- | -- |
| 25.68 | 0.236 | 10.5 | 1.32 | 0.598 | -0.648 | -0.414 | -- | 0.323 | 19.2 | 26.49 | 89 | -- | -- |
| 26.13 | 0.238 | 10.5 | 1.33 | 0.596 | -0.655 | -- | 0.00427 | 0.32 | 19.3 | 26.49 | 89 | -- | -- |
| 26.13 | 0.238 | 10.5 | 1.33 | 0.596 | -0.655 | -- | -- | 0.32 | 19.3 | 26.48 | 89 | -- | -- |
| 39.78 | 0.294 | 10.5 | 1.15 | -- | -1.03 | -- | 0.657 | 0.281 | -- | 41.81 | 373 | -- | -- |
| 31.72 | 0.264 | 10.5 | 1.48 | 0.672 | -- | -0.45 | -- | 0.466 | 18.4 | -- | -- | -- | -- |
| 32.22 | 0.266 | 10.5 | 1.49 | 0.67 | -- | -- | -- | 0.464 | 18.4 | -- | -- | -- | -- |
| 39.43 | 0.292 | 10.5 | 1.24 | -- | -0.969 | -- | -- | 0.265 | -- | 30.1 | 379 | -- | -- |
| 68.48 | 0.385 | 10.6 | -- | 0.489 | -1.02 | -- | -- | 0.111 | 19.8 | 26.97 | 89 | -- | -- |
| 55.53 | 0.348 | 10.5 | 1.47 | -- | -- | -- | -- | 0.45 | -- | -- | -- | -- | -- |
| 90.62 | 0.445 | 10.5 | -- | 0.65 | -- | -- | -- | 0.298 | 18.5 | -- | -- | -- | -- |
| 76.47 | 0.407 | 10.6 | -- | -- | -1.38 | -- | -- | 0.034 | -- | 28.7 | 407 | -- | -- |
| 112.62 | 0.495 | 10.5 | -- | -- | -- | -- | -- | 0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.62 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 10 | 25.13 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 13 |
| 11 | 25.16 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 13 | 25.19 | temperature | 20 | 90 | > th | dose dependent | sin | 8 | NA |
| 22 | 25.45 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 30 | 25.57 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 64 | 25.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 77 | 25.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 80 | 25.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 86 | 25.96 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 107 | 26.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 112 | 26.09 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 124 | 26.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 131 | 26.16 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 135 | 26.18 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 142 | 26.20 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 152 | 26.23 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 187 | 26.31 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 22 |
| 192 | 26.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 222 | 26.36 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 3 |
| 236 | 26.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 239 | 26.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 252 | 26.39 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 272 | 26.42 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 308 | 26.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 312 | 26.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 314 | 26.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 321 | 26.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 338 | 26.52 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 350 | 26.53 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 352 | 26.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 365 | 26.55 | temperature | 25 | 90 | > th | dose independent | rect. | 22 | 21 |
| 391 | 26.58 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 14 |
| 403 | 26.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 415 | 26.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 419 | 26.60 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 420 | 26.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 449 | 26.64 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 510 | 26.70 | temperature | 20 | 270 | < th | dose independent | sin | 8 | NA |
| 536 | 26.72 | temperature | 20 | 270 | > th | dose independent | sin | 8 | NA |
| 540 | 26.72 | temperature | 15 | 30 | > th | dose dependent | no | NA | NA |
| 600 | 26.76 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 23 |
| 635 | 26.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 639 | 26.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 664 | 26.81 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 674 | 26.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 16 |
| 676 | 26.81 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 17 |
| 724 | 26.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 729 | 26.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 755 | 26.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 835 | 26.87 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 846 | 26.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 15 |
| 861 | 26.87 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 21 |
| 884 | 26.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 919 | 26.89 | temperature | 25 | 90 | < th | dose independent | rect. | 17 | 22 |
| 950 | 26.90 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 975 | 26.91 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 22 |
| 988 | 26.92 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 11 |