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Os09g0442600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RSH2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0282) R2 : 0.722
β1 : 0.894 (0.103) R2dD : 0.0476 R2D : -0.00209
β2 : 2.19 (0.0668) R2dC : 0.656 R2C : 0.632
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.517 (0.0601) R2dN8 : 0.0605 R2N8 : 0.0236
σ : 0.53
deviance : 128.01
__
_____
C
peak time of C : 11.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.29 0.478 11.5 0.908 1.22 -0.833 -1.85 -2.32 0.528 11.4 0.04 29 -- --
107.91 0.484 11.6 0.788 1.19 -0.865 0.701 -- 0.531 11.3 0.001155 26 -- --
105.46 0.478 11.5 0.849 1.18 -0.864 -- -0.879 0.499 11.4 0.0301 26 -- --
110.14 0.489 11.6 0.798 1.18 -0.868 -- -- 0.532 11.4 0.02999 24 -- --
123.18 0.517 11.6 0.769 -- -1.66 -- -0.97 0.524 -- 0.01894 24 -- --
125.6 0.525 11.5 0.864 2.19 -- 0.746 -- 0.514 11.6 -- -- -- --
128.01 0.53 11.5 0.894 2.19 -- -- -- 0.517 11.6 -- -- -- --
126.48 0.524 11.6 0.71 -- -1.67 -- -- 0.483 -- 0.04 24 -- --
127.71 0.526 11.6 -- 1.14 -0.893 -- -- 0.537 11.4 0.00313 24 -- --
428.8 0.968 11.6 0.833 -- -- -- -- 0.492 -- -- -- -- --
149.08 0.571 11.6 -- 2.18 -- -- -- 0.418 11.6 -- -- -- --
139.27 0.55 11.6 -- -- -1.69 -- -- 0.416 -- 0.009997 26 -- --
447.12 0.987 11.6 -- -- -- -- -- 0.4 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.62 wind 5.0 90 < th dose independent rect. 18 10
2 94.59 radiation 30.0 1440 < th dose dependent rect. 19 10
5 96.02 radiation 10.0 1440 < th dose independent rect. 19 10
12 98.26 precipitation 0.1 90 < th dose independent rect. 18 10
13 98.26 precipitation 0.1 90 < th dose dependent rect. 18 10
19 99.54 wind 9.0 90 < th dose dependent rect. 18 10
23 100.29 radiation 10.0 90 < th dose dependent rect. 18 10
24 100.32 radiation 10.0 90 < th dose independent rect. 18 10
28 100.36 temperature 10.0 90 > th dose independent rect. 18 10
29 100.36 humidity 50.0 90 > th dose independent rect. 18 10
33 100.36 temperature 10.0 90 > th dose independent rect. 4 14
34 100.36 atmosphere 1015.0 90 < th dose independent rect. 4 14
35 100.43 atmosphere 995.0 90 > th dose independent rect. 18 10
36 100.45 wind 9.0 90 < th dose independent rect. 4 14
38 100.95 humidity 50.0 270 > th dose dependent rect. 20 11
44 101.31 precipitation 0.1 90 < th dose independent rect. 4 14
45 101.31 precipitation 0.1 90 < th dose dependent rect. 4 14
46 101.35 temperature 10.0 1440 > th dose independent rect. 19 10
49 101.35 temperature 30.0 1440 < th dose independent rect. 19 10
53 101.35 humidity 50.0 1440 > th dose independent rect. 19 10
55 101.35 atmosphere 995.0 1440 > th dose independent rect. 19 10
68 101.35 temperature 10.0 1440 > th dose independent rect. 5 14
73 101.65 precipitation 0.1 10 < th dose independent rect. 19 10
74 101.65 precipitation 0.1 10 < th dose dependent rect. 19 10
75 101.85 temperature 30.0 10 < th dose independent rect. 18 11
78 102.18 radiation 1.0 10 < th dose dependent rect. 18 11
84 102.52 humidity 60.0 10 > th dose independent rect. 18 11
89 102.79 wind 1.0 90 > th dose independent rect. 18 10
90 102.79 atmosphere 995.0 90 > th dose independent rect. 4 14
101 103.06 radiation 40.0 90 < th dose independent rect. 4 14
105 103.18 precipitation 0.1 270 < th dose independent rect. 16 11
106 103.18 precipitation 0.1 270 < th dose dependent rect. 16 11
108 103.25 wind 9.0 10 < th dose dependent rect. 19 10
112 103.37 radiation 1.0 10 < th dose dependent sin 12 NA
124 103.56 radiation 40.0 10 < th dose dependent rect. 5 13
148 104.12 temperature 10.0 10 > th dose independent rect. 19 10
152 104.12 atmosphere 995.0 10 > th dose independent rect. 19 10
158 104.12 temperature 10.0 10 > th dose independent rect. 5 14
160 104.12 atmosphere 1015.0 10 < th dose independent rect. 5 14
166 104.33 precipitation 0.1 10 < th dose independent rect. 5 14
167 104.33 precipitation 0.1 10 < th dose dependent rect. 5 14
179 104.52 wind 9.0 10 < th dose independent rect. 5 14
186 104.66 radiation 40.0 10 < th dose independent rect. 5 14
194 104.86 wind 5.0 90 < th dose independent rect. 8 20
200 104.91 temperature 10.0 270 > th dose independent rect. 16 11
201 104.91 radiation 40.0 270 < th dose independent rect. 16 11
233 105.33 temperature 20.0 270 > th dose independent rect. 12 18
287 105.78 precipitation 0.1 10 < th dose independent rect. 8 21
288 105.78 precipitation 0.1 10 < th dose dependent rect. 8 21
289 105.79 humidity 90.0 270 < th dose independent rect. 16 20
290 105.79 humidity 60.0 10 > th dose dependent rect. 5 3
291 105.80 radiation 1.0 10 > th dose independent sin 12 NA
292 105.80 radiation 1.0 10 < th dose independent sin 12 NA
304 105.81 temperature 20.0 10 > th dose independent rect. 14 18
307 105.86 radiation 1.0 90 < th dose dependent rect. 9 19
320 105.93 atmosphere 995.0 270 > th dose independent rect. 2 14
323 105.95 humidity 60.0 90 > th dose dependent rect. 4 4
328 106.01 wind 7.0 720 < th dose independent rect. 15 13
345 106.13 radiation 1.0 10 > th dose independent rect. 14 18
359 106.22 atmosphere 995.0 10 > th dose independent rect. 5 14
368 106.30 precipitation 0.1 90 < th dose independent rect. 8 20
370 106.30 precipitation 0.1 90 < th dose dependent rect. 8 20
377 106.36 wind 7.0 720 < th dose independent rect. 15 5
380 106.39 radiation 1.0 90 < th dose independent rect. 9 19
397 106.54 wind 7.0 720 < th dose independent rect. 16 3
401 106.58 humidity 50.0 270 > th dose independent rect. 6 6
402 106.58 wind 7.0 10 < th dose independent rect. 8 21
405 106.61 radiation 1.0 270 > th dose independent rect. 16 21
408 106.64 humidity 80.0 90 > th dose independent rect. 4 4
410 106.65 wind 9.0 90 < th dose dependent rect. 8 20
416 106.69 atmosphere 1015.0 90 < th dose independent rect. 18 10
440 106.87 temperature 20.0 10 > th dose independent rect. 5 3
441 106.87 radiation 1.0 270 > th dose independent rect. 6 6
450 106.90 temperature 10.0 90 > th dose dependent rect. 4 4
452 106.91 wind 7.0 10 < th dose dependent rect. 5 3
454 106.92 precipitation 0.1 270 < th dose independent rect. 5 23
455 106.92 precipitation 0.1 270 < th dose dependent rect. 5 23
459 106.96 precipitation 0.1 270 < th dose independent rect. 6 6
461 106.96 temperature 10.0 10 > th dose dependent rect. 5 3
462 106.96 precipitation 0.1 270 < th dose dependent rect. 6 6
465 106.99 wind 9.0 1440 < th dose independent rect. 5 4
466 106.99 temperature 10.0 1440 > th dose independent rect. 5 4
469 106.99 humidity 50.0 1440 > th dose independent rect. 5 4
471 106.99 atmosphere 995.0 1440 > th dose independent rect. 5 4
472 106.99 atmosphere 1015.0 1440 < th dose independent rect. 5 4
473 106.99 temperature 10.0 1440 > th dose independent rect. 9 20
477 106.99 wind 9.0 10 < th dose dependent rect. 8 21
480 107.00 radiation 40.0 90 < th dose dependent rect. 4 4
482 107.01 temperature 10.0 270 > th dose independent rect. 6 6
483 107.01 atmosphere 995.0 270 > th dose independent rect. 6 6
484 107.01 atmosphere 1015.0 270 < th dose independent rect. 6 6
494 107.03 humidity 50.0 270 > th dose dependent rect. 12 18
498 107.05 humidity 50.0 10 > th dose dependent rect. 5 13
500 107.06 precipitation 0.1 270 < th dose independent rect. 2 14
502 107.06 precipitation 0.1 270 < th dose dependent rect. 2 14
503 107.07 wind 9.0 270 < th dose independent rect. 6 6
504 107.07 atmosphere 995.0 270 > th dose independent rect. 12 18
506 107.10 wind 9.0 90 < th dose dependent rect. 4 4
544 107.38 humidity 50.0 270 > th dose independent rect. 7 4
602 107.55 radiation 20.0 90 < th dose independent rect. 4 4
613 107.59 atmosphere 1010.0 90 < th dose independent rect. 4 4
618 107.60 wind 3.0 90 < th dose independent rect. 4 4
619 107.60 radiation 1.0 270 > th dose independent rect. 7 4
624 107.61 radiation 40.0 10 < th dose independent rect. 5 3
631 107.63 wind 5.0 10 < th dose independent rect. 5 3
639 107.65 precipitation 0.1 270 < th dose independent rect. 7 4
641 107.65 precipitation 0.1 270 < th dose dependent rect. 7 4
642 107.66 wind 9.0 270 < th dose independent rect. 12 18
645 107.67 temperature 10.0 10 > th dose independent rect. 5 3
647 107.67 temperature 30.0 10 < th dose independent rect. 5 3
648 107.67 humidity 50.0 10 > th dose independent rect. 5 3
650 107.67 atmosphere 995.0 10 > th dose independent rect. 5 3
651 107.67 atmosphere 1015.0 10 < th dose independent rect. 5 3
652 107.67 wind 9.0 90 < th dose independent rect. 4 4
653 107.67 temperature 10.0 90 > th dose independent rect. 4 4
655 107.67 temperature 30.0 90 < th dose independent rect. 4 4
656 107.67 humidity 50.0 90 > th dose independent rect. 4 4
658 107.67 atmosphere 995.0 90 > th dose independent rect. 4 4
661 107.67 temperature 10.0 90 > th dose independent rect. 8 20
662 107.67 temperature 10.0 10 > th dose independent rect. 8 21
663 107.67 atmosphere 1015.0 10 < th dose dependent rect. 5 3
664 107.67 radiation 40.0 10 < th dose dependent rect. 5 3
667 107.68 precipitation 0.1 270 < th dose independent rect. 15 23
670 107.68 precipitation 0.1 270 < th dose dependent rect. 15 23
672 107.69 temperature 10.0 270 > th dose independent rect. 7 4
673 107.69 atmosphere 995.0 270 > th dose independent rect. 7 4
674 107.69 atmosphere 1015.0 270 < th dose independent rect. 7 4
684 107.72 wind 9.0 270 < th dose independent rect. 7 4
693 107.76 atmosphere 1015.0 90 < th dose dependent rect. 4 3
694 107.77 precipitation 0.1 10 < th dose independent rect. 5 3
695 107.77 precipitation 0.1 10 < th dose dependent rect. 5 3
701 107.80 precipitation 0.1 90 < th dose independent rect. 4 4
704 107.80 precipitation 0.1 90 < th dose dependent rect. 4 4
707 107.81 precipitation 0.1 270 < th dose independent rect. 7 14
708 107.81 precipitation 0.1 270 < th dose dependent rect. 7 14
720 107.87 atmosphere 995.0 90 > th dose dependent rect. 18 10
733 107.92 atmosphere 995.0 270 > th dose independent rect. 11 20
737 107.93 radiation 40.0 90 < th dose independent rect. 13 19
770 108.04 humidity 50.0 270 > th dose independent rect. 12 18
777 108.06 atmosphere 995.0 10 > th dose independent rect. 8 21
785 108.10 radiation 1.0 10 > th dose independent rect. 8 6
824 108.24 atmosphere 995.0 90 > th dose independent rect. 8 20
825 108.24 radiation 40.0 10 < th dose independent rect. 12 20
832 108.26 humidity 70.0 270 > th dose dependent rect. 4 1
840 108.28 atmosphere 1005.0 90 > th dose independent rect. 18 10
845 108.28 temperature 10.0 90 > th dose dependent rect. 4 14
850 108.30 atmosphere 1015.0 270 < th dose independent rect. 12 18
865 108.34 radiation 1.0 90 > th dose independent rect. 8 6
878 108.38 humidity 50.0 90 > th dose independent rect. 8 20
897 108.44 wind 9.0 270 < th dose independent rect. 11 20
919 108.49 wind 1.0 270 > th dose independent rect. 16 11
926 108.51 humidity 80.0 270 > th dose independent rect. 4 1
963 108.58 wind 1.0 10 > th dose independent rect. 8 6
967 108.59 humidity 50.0 270 > th dose independent rect. 8 2
968 108.59 radiation 40.0 10 < th dose independent rect. 14 18
980 108.62 wind 1.0 270 > th dose independent rect. 6 6
993 108.64 wind 1.0 90 > th dose independent rect. 18 19