Os09g0437500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dormancyauxin associated family protein.
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Os09g0437500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dormancyauxin associated family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.28 | 0.748 | 13 | 2.31 | 2.68 | -2.09 | 1.63 | 1.98 | 1.46 | 20.8 | -0.1082 | 10 | -- | -- |
| 259.12 | 0.75 | 13 | 2.36 | 2.67 | -2.18 | 0.572 | -- | 1.48 | 20.7 | -4.069 | 8 | -- | -- |
| 258.76 | 0.749 | 13 | 2.3 | 2.66 | -2.13 | -- | 0.804 | 1.47 | 20.8 | -4.549 | 8 | -- | -- |
| 260.31 | 0.751 | 13 | 2.33 | 2.66 | -2.15 | -- | -- | 1.47 | 20.7 | -2.795 | 8 | -- | -- |
| 552.78 | 1.1 | 12.9 | 2.29 | -- | -3.93 | -- | 0.601 | 1.43 | -- | -95.85 | 9 | -- | -- |
| 320.47 | 0.839 | 13 | 2.33 | 3.53 | -- | 0.424 | -- | 1.47 | 21.8 | -- | -- | -- | -- |
| 321.15 | 0.839 | 13 | 2.31 | 3.52 | -- | -- | -- | 1.47 | 21.8 | -- | -- | -- | -- |
| 553.66 | 1.1 | 12.9 | 2.31 | -- | -3.94 | -- | -- | 1.44 | -- | -60.77 | 9 | -- | -- |
| 405.5 | 0.938 | 13 | -- | 2.67 | -2.17 | -- | -- | 1.28 | 20.7 | -8.477 | 43 | -- | -- |
| 1061.31 | 1.52 | 12.9 | 2.35 | -- | -- | -- | -- | 1.47 | -- | -- | -- | -- | -- |
| 461.94 | 1.01 | 13.1 | -- | 3.53 | -- | -- | -- | 1.22 | 21.8 | -- | -- | -- | -- |
| 694.68 | 1.23 | 13 | -- | -- | -3.96 | -- | -- | 1.18 | -- | -36.65 | 8 | -- | -- |
| 1206.42 | 1.62 | 13 | -- | -- | -- | -- | -- | 1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.18 | radiation | 1 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 2 | 245.38 | radiation | 40 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 3 | 246.31 | radiation | 40 | 10 | < th | dose dependent | sin | 4 | NA |
| 6 | 247.26 | radiation | 1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 19 | 248.14 | radiation | 1 | 10 | > th | dose dependent | sin | 4 | NA |
| 34 | 248.65 | radiation | 40 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 53 | 251.65 | humidity | 50 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 58 | 251.98 | radiation | 40 | 30 | < th | dose independent | rect. | 1 | 17 |
| 92 | 253.62 | radiation | 40 | 30 | < th | dose independent | rect. | 23 | 23 |
| 94 | 253.66 | radiation | 40 | 10 | < th | dose dependent | rect. | 1 | 14 |
| 100 | 254.16 | radiation | 1 | 10 | > th | dose dependent | no | NA | NA |
| 101 | 254.16 | radiation | 1 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 188 | 254.74 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 211 | 256.56 | radiation | 1 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 225 | 256.65 | radiation | 40 | 10 | < th | dose dependent | no | NA | NA |
| 227 | 256.74 | radiation | 40 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 246 | 256.95 | radiation | 40 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 274 | 257.93 | radiation | 1 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 406 | 259.53 | radiation | 30 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 431 | 260.21 | humidity | 70 | 10 | > th | dose independent | rect. | 1 | 16 |
| 450 | 260.45 | radiation | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 465 | 261.01 | radiation | 40 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 499 | 261.67 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 16 |
| 508 | 261.90 | radiation | 1 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 521 | 262.30 | humidity | 90 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 539 | 262.72 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 544 | 262.95 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 553 | 263.11 | radiation | 20 | 30 | < th | dose independent | rect. | 23 | 23 |
| 565 | 263.45 | radiation | 20 | 30 | > th | dose independent | rect. | 15 | 23 |
| 738 | 263.99 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 742 | 264.05 | humidity | 50 | 10 | > th | dose dependent | sin | 4 | NA |
| 743 | 264.06 | radiation | 40 | 30 | < th | dose independent | rect. | 1 | 14 |
| 774 | 264.36 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 813 | 264.82 | radiation | 20 | 270 | < th | dose independent | rect. | 23 | 15 |
| 858 | 265.27 | humidity | 60 | 90 | > th | dose independent | rect. | 1 | 16 |
| 875 | 265.65 | radiation | 20 | 30 | < th | dose independent | rect. | 1 | 13 |