Os09g0433000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os09g0433000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 533.46 | 1.09 | 6.62 | -4.99 | 1.36 | 4.18 | 1.67 | -2.38 | -0.527 | 5.59 | 20.37 | 1542 | 16.6 | 2.31 |
| 536.42 | 1.08 | 6.61 | -4.5 | 1.4 | 4.23 | 1.73 | -- | -0.446 | 5.62 | 20.04 | 1552 | 16.7 | 2.28 |
| 540.3 | 1.08 | 6.63 | -5.01 | 1.38 | 4.2 | -- | -2.53 | -0.538 | 5.58 | 20.38 | 1543 | 16.7 | 2.31 |
| 543.34 | 1.09 | 6.59 | -4.53 | 1.38 | 4.16 | -- | -- | -0.464 | 5.48 | 20 | 1540 | 16.7 | 2.27 |
| 560.93 | 1.1 | 6.64 | -4.91 | -- | 3.28 | -- | -1.2 | -0.536 | -- | 20.4 | 2527 | 16.5 | 2.07 |
| 872.21 | 1.38 | 6.47 | -3.61 | 1.03 | -- | 1.54 | -- | 0.0642 | 4.81 | -- | -- | -- | -- |
| 878.36 | 1.39 | 6.48 | -3.62 | 1.04 | -- | -- | -- | 0.0563 | 4.72 | -- | -- | -- | -- |
| 558.68 | 1.1 | 6.63 | -4.61 | -- | 3.26 | -- | -- | -0.525 | -- | 20.26 | 2518 | 16.7 | 1.87 |
| 1061.99 | 1.52 | 6.55 | -- | 1.35 | 3.79 | -- | -- | 0.0635 | 4.99 | 21.79 | 1575 | 16.7 | 2.27 |
| 935.91 | 1.43 | 6.49 | -3.58 | -- | -- | -- | -- | 0.0835 | -- | -- | -- | -- | -- |
| 1223.05 | 1.64 | 6.39 | -- | 0.976 | -- | -- | -- | 0.459 | 4.82 | -- | -- | -- | -- |
| 1082.96 | 1.53 | 6.59 | -- | -- | 3.41 | -- | -- | -0.0637 | -- | 23.5 | 1482 | 18.2 | 0.467 |
| 1273.41 | 1.67 | 6.4 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 559.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 2 | 560.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 70 | 572.40 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 20 |
| 90 | 573.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 109 | 574.56 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 123 | 575.13 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 124 | 575.13 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 167 | 576.39 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 209 | 577.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 214 | 577.49 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 232 | 577.80 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 237 | 577.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 290 | 579.00 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 325 | 579.73 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 22 |
| 353 | 580.07 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 356 | 580.16 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 381 | 580.44 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 421 | 580.79 | wind | 9 | 43200 | > th | dose dependent | sin | 14 | NA |
| 428 | 580.85 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 429 | 580.85 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 436 | 580.90 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 437 | 580.91 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 501 | 581.60 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 509 | 581.67 | wind | 5 | 43200 | > th | dose dependent | sin | 15 | NA |
| 514 | 581.72 | wind | 5 | 43200 | > th | dose independent | sin | 14 | NA |
| 518 | 581.73 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 521 | 581.73 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 550 | 582.11 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 559 | 582.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 706 | 583.78 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 19 |
| 710 | 583.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 764 | 584.28 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 16 |
| 784 | 584.44 | wind | 5 | 43200 | < th | dose independent | sin | 14 | NA |
| 792 | 584.50 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 805 | 584.61 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 822 | 584.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 866 | 585.21 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 16 |
| 872 | 585.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |