Os09g0432900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os09g0432900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 246.63 | 0.738 | 8.28 | -3.48 | 0.757 | -2.04 | 2 | 8.01 | 0.0936 | 4.64 | 34.2 | 1040 | -- | -- |
| 249.22 | 0.735 | 8.14 | -2.55 | 0.727 | -1.15 | 1.83 | -- | 0.0635 | 4.73 | 33.6 | 1061 | -- | -- |
| 257.22 | 0.747 | 8.28 | -3.48 | 0.768 | -2.04 | -- | 7.82 | 0.0875 | 4.68 | 34.2 | 1049 | -- | -- |
| 258.49 | 0.749 | 8.16 | -2.4 | 0.766 | -1.15 | -- | -- | 0.0885 | 4.66 | 33.7 | 1086 | -- | -- |
| 287.67 | 0.79 | 8.29 | -3.48 | -- | -2.12 | -- | 7.77 | 0.137 | -- | 33.9 | 1080 | -- | -- |
| 311.32 | 0.827 | 8.2 | -2.12 | 0.853 | -- | 2.16 | -- | -0.0865 | 4.08 | -- | -- | -- | -- |
| 324.59 | 0.844 | 8.21 | -2.14 | 0.866 | -- | -- | -- | -0.0985 | 4.06 | -- | -- | -- | -- |
| 287.92 | 0.79 | 8.16 | -2.39 | -- | -1.25 | -- | -- | 0.129 | -- | 33.66 | 1086 | -- | -- |
| 405.39 | 0.938 | 8.12 | -- | 0.718 | -0.901 | -- | -- | 0.253 | 4.67 | 34.11 | 1039 | -- | -- |
| 365.39 | 0.893 | 8.21 | -2.1 | -- | -- | -- | -- | -0.0754 | -- | -- | -- | -- | -- |
| 445.29 | 0.987 | 8.15 | -- | 0.824 | -- | -- | -- | 0.14 | 4.1 | -- | -- | -- | -- |
| 433.59 | 0.97 | 8.12 | -- | -- | -0.974 | -- | -- | 0.335 | -- | 34.2 | 1059 | -- | -- |
| 482.26 | 1.03 | 8.16 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.27 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 13 | 247.57 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 16 | 247.94 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 18 | 248.44 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 24 | 249.35 | humidity | 60 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 26 | 249.69 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 29 | 249.88 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 30 | 249.90 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 42 | 249.91 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 69 | 250.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 71 | 250.41 | humidity | 60 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 72 | 250.42 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 87 | 250.98 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 104 | 251.18 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 164 | 251.61 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 165 | 251.66 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 9 |
| 182 | 251.79 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 183 | 251.79 | temperature | 30 | 1440 | > th | dose dependent | sin | 13 | NA |
| 185 | 251.86 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 186 | 251.87 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 187 | 251.91 | radiation | 30 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 202 | 252.12 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 203 | 252.15 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 312 | 252.72 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 314 | 252.73 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 504 | 253.50 | humidity | 60 | 1440 | < th | dose dependent | sin | 12 | NA |
| 517 | 253.63 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 571 | 253.87 | wind | 5 | 43200 | > th | dose independent | sin | 15 | NA |
| 572 | 253.88 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 583 | 253.98 | wind | 5 | 43200 | > th | dose dependent | sin | 15 | NA |
| 588 | 254.05 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 610 | 254.11 | wind | 5 | 43200 | < th | dose independent | sin | 14 | NA |
| 624 | 254.18 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 21 |
| 637 | 254.28 | humidity | 60 | 1440 | < th | dose independent | sin | 12 | NA |
| 832 | 254.99 | humidity | 60 | 1440 | > th | dose independent | sin | 12 | NA |
| 883 | 255.15 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 21 |
| 923 | 255.30 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 22 |
| 969 | 255.39 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |