BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0432900 Os09g0432900|AK106115
         (334 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57500.1  | chr5:23286406-23287525 REVERSE LENGTH=319          225   2e-59
AT2G32430.1  | chr2:13771626-13774102 FORWARD LENGTH=410           53   2e-07
AT3G06440.1  | chr3:1972913-1975272 REVERSE LENGTH=620             50   2e-06

>AT5G57500.1 | chr5:23286406-23287525 REVERSE LENGTH=319
          Length = 318

 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/255 (45%), Positives = 159/255 (62%), Gaps = 15/255 (5%)

Query: 91  ELRLLVGVLTTPKRYERRNIVRLAYALQPAVPPGVAQVDVRFVFCRVADPVDAQLVVLEA 150
           E+R+L+G+LT P +Y RR+ +R+ Y  Q  VP GV +VDV+FVFC +       LV LE 
Sbjct: 68  EIRILIGILTLPDQYSRRHFLRMIYGTQ-NVPDGV-KVDVKFVFCNLTKEDQKVLVALEI 125

Query: 151 ARHGDILVLNCTENMNDGKTHEYLSSVPRMFASS-----PYDYVMKTDDDTYLRVAALVD 205
            R+ DI++LNC ENMN GKT+ Y SS+P +F  +     PY YVMK DDDTY+R+ +LV 
Sbjct: 126 MRYDDIIILNCNENMNKGKTYTYFSSLPDIFNETDAQKPPYHYVMKADDDTYIRLESLVA 185

Query: 206 ELRHKPRDDVYLGYGFAVGD-DP-MQFMHGMGYVVSWDVATWVSTNEDILRYNDTHGPED 263
            LR  PR+D+Y GY       DP + +M GMGY+VSWD+A W+  +E  +      GPED
Sbjct: 186 SLRPLPREDLYYGYVIPCPSMDPFVHYMSGMGYLVSWDIAVWLKDSE--IPKKHLEGPED 243

Query: 264 LLVGKWLNIGRRGKNRYSLRPRMYDL----NWDMDNFRPDTVLVHMLKDNRRWAAAFRYF 319
            + G W+  GRRGKNR++ +  MY+             PDT+ VH+LK+  +W     YF
Sbjct: 244 KVFGDWIREGRRGKNRFNAKWSMYNFPEPPTRCTHELWPDTIAVHLLKNQEKWIRTLNYF 303

Query: 320 NVTAGLQPSNLYHFP 334
           NVT+ L+PS LYH P
Sbjct: 304 NVTSNLKPSKLYHIP 318



>AT2G32430.1 | chr2:13771626-13774102 FORWARD LENGTH=410
          Length = 409

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 49/213 (23%)

Query: 94  LLVGVLTTPKRYERRNIVRLAYALQPAVPPGVAQ--------VDVRFVF--CRVADPVDA 143
           ++VG+ T     +RR+ VR  +     +P G  +        + +RFV      A  +  
Sbjct: 142 MVVGINTAFSSRKRRDSVRTTW-----MPSGEKRKKLEEEKGIIIRFVIGHSATAGGILD 196

Query: 144 QLVVLEAARHGDILVLNCTENMND--GKTHEYLSSVPRMFASSPYD--YVMKTDDDTYLR 199
           + +  E  +HGD L L+  E   +  GKT  Y S+     A S +D  + +K DDD ++ 
Sbjct: 197 RSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFST-----AVSKWDAEFYVKVDDDVHVN 251

Query: 200 VAALVDEL-RHKPRDDVYLGYG------------------FAVGDDPMQ-FMHGMG--YV 237
           +A L + L RH+ +  VYLG                    +  G++  + F H  G  Y 
Sbjct: 252 IATLGETLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYA 311

Query: 238 VSWDVATWVSTNEDILRYNDTHGPEDLLVGKWL 270
           +S D+A+++S N+ +L     +  ED+ +G W 
Sbjct: 312 ISRDLASYISLNQHVLH---KYANEDVTLGAWF 341



>AT3G06440.1 | chr3:1972913-1975272 REVERSE LENGTH=620
          Length = 619

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 35/205 (17%)

Query: 92  LRLLVGVLTTPKRYERRNIVRLAYALQPAVPPGVAQVDVRFVF-CRVADPVDAQLVVLEA 150
           + LLVGV +T   ++RR  +R ++    AV  G  +V VRF+      + V+ ++   E+
Sbjct: 371 IELLVGVFSTGNNFKRRMALRRSWMQYEAVRSG--KVAVRFLIGLHTNEKVNLEMW-RES 427

Query: 151 ARHGDILVLNCTENMNDGKTHEYLSSVPRMFASS---PYDYVMKTDDDTYLRVAALVDEL 207
             +GDI  +       D      L +V      +   P  Y+MKTDDD ++R+  L+  L
Sbjct: 428 KAYGDIQFMPFV----DYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSL 483

Query: 208 RHKPRDDVYLGY-GFAVGDDPMQ------------------FMHGMGYVVSWDVATWVST 248
             +P   +  G   F    D  Q                  + HG GY++S D+A +V  
Sbjct: 484 EERPSSALLYGLISFDSSPDREQGSKWFIPKEEWPLDSYPPWAHGPGYIISHDIAKFVVK 543

Query: 249 NEDILRYND--THGPEDLLVGKWLN 271
                R  D      ED+ +G W+ 
Sbjct: 544 GH---RQRDLGLFKLEDVAMGIWIQ 565



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.139    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,194,916
Number of extensions: 298624
Number of successful extensions: 487
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 485
Number of HSP's successfully gapped: 3
Length of query: 334
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 235
Effective length of database: 8,392,385
Effective search space: 1972210475
Effective search space used: 1972210475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)