Os09g0421500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0421500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.57 | 0.356 | 10.4 | 0.194 | 0.223 | 1.92 | -0.672 | 0.847 | 0.165 | 8.25 | 27.72 | 20 | -- | -- |
| 58.33 | 0.356 | 10.4 | 0.357 | 0.192 | 1.94 | -0.843 | -- | 0.201 | 9.25 | 28.22 | 25 | -- | -- |
| 58.77 | 0.357 | 10.5 | 0.125 | 0.228 | 1.89 | -- | 1.03 | 0.149 | 7.25 | 27.43 | 20 | -- | -- |
| 60.43 | 0.362 | 10.4 | 0.304 | 0.226 | 1.85 | -- | -- | 0.188 | 7.24 | 27.86 | 26 | -- | -- |
| 60.76 | 0.363 | 10.5 | 0.174 | -- | 1.95 | -- | 0.95 | 0.164 | -- | 27.73 | 63 | -- | -- |
| 106.19 | 0.483 | 10.5 | -0.133 | 0.654 | -- | 0.769 | -- | -0.211 | 3.21 | -- | -- | -- | -- |
| 107.96 | 0.487 | 10.5 | -0.148 | 0.664 | -- | -- | -- | -0.216 | 3.5 | -- | -- | -- | -- |
| 62.15 | 0.367 | 10.4 | 0.38 | -- | 1.92 | -- | -- | 0.22 | -- | 28.08 | 62 | -- | -- |
| 62.56 | 0.368 | 10.4 | -- | 0.245 | 1.72 | -- | -- | 0.13 | 6.54 | 27.77 | 25 | -- | -- |
| 132.61 | 0.538 | 10.5 | -0.12 | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
| 108.54 | 0.487 | 10.5 | -- | 0.661 | -- | -- | -- | -0.199 | 3.5 | -- | -- | -- | -- |
| 64.72 | 0.375 | 10.4 | -- | -- | 1.81 | -- | -- | 0.142 | -- | 28.12 | 67 | -- | -- |
| 133 | 0.538 | 10.5 | -- | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 2 | 51.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 3 | 51.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 7 | 52.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 31 | 54.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 104 | 59.56 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 107 | 59.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 108 | 59.72 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 111 | 59.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 121 | 60.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 124 | 60.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 136 | 60.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 160 | 61.54 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 163 | 61.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 166 | 61.62 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 195 | 62.16 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 270 | 63.31 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 345 | 64.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 350 | 64.83 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 537 | 68.39 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 544 | 68.45 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 553 | 68.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 16 |
| 557 | 68.53 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 578 | 68.70 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 616 | 69.12 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 688 | 69.70 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 813 | 70.50 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |