Os09g0415300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0415300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.37 | 0.48 | 3.37 | -0.393 | 0.0442 | 1.86 | 0.51 | -7.97 | 0.0637 | 14.6 | 999.8 | 93 | -- | -- |
| 105.7 | 0.483 | 3.28 | 0.119 | 0.031 | 0.417 | 0.488 | -- | 0.0616 | 14.9 | 999.8 | 93 | -- | -- |
| 105.25 | 0.478 | 3.37 | -0.376 | 0.0506 | 1.85 | -- | -7.86 | 0.0659 | 12.4 | 999.7 | 86 | -- | -- |
| 106.01 | 0.48 | 3.28 | 0.132 | 0.0378 | 0.453 | -- | -- | 0.0684 | 14.5 | 999.8 | 109 | -- | -- |
| 105.41 | 0.478 | 3.37 | -0.376 | -- | 1.83 | -- | -7.77 | 0.0658 | -- | 999.7 | 80 | -- | -- |
| 110.34 | 0.492 | 3.29 | 0.191 | 0.0442 | -- | 0.513 | -- | 0.0347 | 14.7 | -- | -- | -- | -- |
| 111.23 | 0.494 | 3.28 | 0.203 | 0.05 | -- | -- | -- | 0.0374 | 12.7 | -- | -- | -- | -- |
| 106.06 | 0.48 | 3.28 | 0.121 | -- | 0.444 | -- | -- | 0.0667 | -- | 1000 | 109 | -- | -- |
| 106.4 | 0.48 | 3.28 | -- | 0.0397 | 0.478 | -- | -- | 0.0553 | 13.9 | 999.8 | 109 | -- | -- |
| 111.39 | 0.493 | 3.28 | 0.202 | -- | -- | -- | -- | 0.0366 | -- | -- | -- | -- | -- |
| 112.32 | 0.496 | 3.29 | -- | 0.047 | -- | -- | -- | 0.0148 | 12.5 | -- | -- | -- | -- |
| 106.43 | 0.48 | 3.28 | -- | -- | 0.465 | -- | -- | 0.0551 | -- | 1000 | 109 | -- | -- |
| 112.46 | 0.495 | 3.29 | -- | -- | -- | -- | -- | 0.0142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.28 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 16 | 96.87 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 6 | 4 |
| 32 | 98.58 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 44 | 98.97 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 2 |
| 57 | 99.11 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 1 |
| 84 | 99.69 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 88 | 99.78 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 101 | 99.98 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 104 | 100.03 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 8 |
| 109 | 100.12 | temperature | 25 | 720 | > th | dose dependent | rect. | 2 | 6 |
| 125 | 100.34 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 9 |
| 130 | 100.40 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 5 | 10 |
| 156 | 100.79 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 7 |
| 160 | 100.89 | atmosphere | 1000 | 720 | < th | dose dependent | sin | 6 | NA |
| 182 | 101.10 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 187 | 101.14 | atmosphere | 1000 | 90 | < th | dose independent | sin | 1 | NA |
| 213 | 101.37 | atmosphere | 1000 | 270 | < th | dose dependent | sin | 3 | NA |
| 243 | 101.54 | atmosphere | 1000 | 90 | > th | dose independent | sin | 1 | NA |
| 263 | 101.66 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 1 | NA |
| 296 | 101.82 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 519 | 102.75 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 5 |
| 572 | 102.90 | atmosphere | 1000 | 10 | > th | dose independent | sin | 0 | NA |
| 599 | 102.96 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 18 |
| 621 | 103.01 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 23 | 11 |
| 637 | 103.05 | temperature | 25 | 720 | > th | dose independent | rect. | 2 | 7 |
| 640 | 103.05 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 7 | 19 |
| 718 | 103.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 821 | 103.33 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 21 | 23 |
| 886 | 103.44 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 924 | 103.50 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 23 | 16 |
| 938 | 103.52 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 2 | 1 |