Os09g0414600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ZF-HD homeobox protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os09g0414600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ZF-HD homeobox protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.29 | 0.313 | 13.8 | 0.433 | 0.508 | -1.19 | -0.915 | -2.3 | -0.0256 | 21.4 | 0.5509 | 1426 | -- | -- |
| 47.01 | 0.319 | 13.8 | 0.381 | 0.461 | -0.585 | -0.865 | -- | 0.0336 | 21.5 | 0.9498 | 1332 | -- | -- |
| 46.97 | 0.319 | 13.8 | 0.434 | 0.514 | -1.2 | -- | -2.46 | -0.0295 | 21.7 | 0.4788 | 1456 | -- | -- |
| 47.78 | 0.322 | 13.8 | 0.229 | 0.409 | -0.656 | -- | -- | -0.0648 | 21.9 | 0.8601 | 2678 | -- | -- |
| 47.62 | 0.321 | 13.8 | 0.275 | -- | -1.02 | -- | 0.497 | -0.0676 | -- | 2.325 | 2557 | -- | -- |
| 51.15 | 0.335 | 13.8 | 0.382 | 0.547 | -- | -0.764 | -- | 0.0266 | 21.6 | -- | -- | -- | -- |
| 53.32 | 0.342 | 13.8 | 0.41 | 0.55 | -- | -- | -- | 0.0274 | 21.6 | -- | -- | -- | -- |
| 47.41 | 0.321 | 13.8 | 0.242 | -- | -1.08 | -- | -- | -0.0864 | -- | 1.29 | 2563 | -- | -- |
| 48.3 | 0.324 | 13.8 | -- | 0.204 | -0.958 | -- | -- | -0.111 | 22.2 | 0.7469 | 2612 | -- | -- |
| 71.21 | 0.394 | 13.8 | 0.415 | -- | -- | -- | -- | 0.0264 | -- | -- | -- | -- | -- |
| 57.76 | 0.355 | 13.8 | -- | 0.551 | -- | -- | -- | -0.0183 | 21.7 | -- | -- | -- | -- |
| 48.67 | 0.325 | 13.8 | -- | -- | -1.09 | -- | -- | -0.095 | -- | 0.9611 | 2568 | -- | -- |
| 75.75 | 0.406 | 13.8 | -- | -- | -- | -- | -- | -0.0196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.63 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 6 |
| 5 | 41.37 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 4 |
| 15 | 42.07 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 18 | 42.16 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 19 | 42.17 | temperature | 25.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 25 | 42.38 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 15 |
| 30 | 42.50 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 10 |
| 39 | 42.82 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 40 | 42.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 4 |
| 50 | 43.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 51 | 43.14 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 52 | 43.15 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 54 | 43.19 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 56 | 43.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 10 |
| 57 | 43.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 60 | 43.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 19 |
| 68 | 43.28 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 74 | 43.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 16 | 9 |
| 79 | 43.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 20 |
| 86 | 43.48 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 89 | 43.49 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 112 | 43.65 | humidity | 60.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 117 | 43.68 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 9 | 19 |
| 122 | 43.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 125 | 43.75 | humidity | 90.0 | 90 | < th | dose independent | rect. | 16 | 19 |
| 127 | 43.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 130 | 43.76 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 146 | 43.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 180 | 43.86 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 185 | 43.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 187 | 43.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 10 |
| 188 | 43.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 190 | 43.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 196 | 43.89 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 205 | 43.90 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 20 |
| 208 | 43.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 1 |
| 221 | 43.94 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 222 | 43.94 | radiation | 1.0 | 720 | < th | dose dependent | sin | 2 | NA |
| 225 | 43.95 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 228 | 43.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 9 |
| 253 | 44.02 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 262 | 44.03 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 263 | 44.03 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 264 | 44.03 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 270 | 44.06 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 6 |
| 275 | 44.07 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 276 | 44.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 277 | 44.07 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 17 |
| 282 | 44.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 7 |
| 284 | 44.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 292 | 44.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 9 |
| 295 | 44.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 300 | 44.12 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 306 | 44.12 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 322 | 44.15 | radiation | 1.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 332 | 44.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 333 | 44.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 6 |
| 335 | 44.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 9 |
| 336 | 44.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 18 |
| 358 | 44.20 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 8 | 21 |
| 370 | 44.21 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 372 | 44.21 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 388 | 44.24 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 9 |
| 389 | 44.24 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 10 |
| 398 | 44.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 15 |
| 400 | 44.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 442 | 44.31 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 9 |
| 443 | 44.31 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 9 |
| 444 | 44.31 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 15 |
| 446 | 44.31 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 1 | 15 |
| 447 | 44.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 18 |
| 448 | 44.31 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 449 | 44.31 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 452 | 44.31 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 462 | 44.33 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 464 | 44.33 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 469 | 44.34 | radiation | 1.0 | 270 | > th | dose independent | sin | 11 | NA |
| 471 | 44.34 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 17 |
| 472 | 44.34 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 495 | 44.36 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 16 |
| 542 | 44.40 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 549 | 44.41 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 9 |
| 552 | 44.41 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 562 | 44.42 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 563 | 44.42 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 594 | 44.44 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 651 | 44.47 | radiation | 1.0 | 270 | < th | dose independent | sin | 11 | NA |
| 653 | 44.47 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 773 | 44.52 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 9 |
| 802 | 44.53 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 817 | 44.53 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 21 | 9 |
| 859 | 44.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 6 |
| 861 | 44.54 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 874 | 44.55 | radiation | 1.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 879 | 44.55 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 880 | 44.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 883 | 44.55 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 20 |
| 908 | 44.56 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 911 | 44.56 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 952 | 44.57 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 956 | 44.57 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 987 | 44.57 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 6 |