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Os09g0412400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.94 (0.0598) R2 : 0.669
β1 : -6.74 (0.275) R2dD : 0.749 R2D : 0.165
β2 : 1.19 (0.153) R2dC : 0.0531 R2C : 0.134
β3 : 4.71 (0.292) R2dE : 0.371 R2E : -0.111
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.223 (0.138) R2dN8 : 0.00327 R2N8 : -0.0285
σ : 1.09
deviance : 550.69
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C
peak time of C : 1.69
E
wheather : temperature
threshold : 19.64
memory length : 3881
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.9
open length of G : 6.47

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
550.28 1.1 8.13 -6.55 1.79 2.17 -0.205 -6.12 -0.262 2.82 20.49 3888 17.5 4.01
590.26 1.13 8.03 -6.26 1.63 3.76 -2.41 -- -0.244 1.98 20.4 3949 16.8 5.42
550.39 1.09 8.13 -6.54 1.8 2.14 -- -6.21 -0.264 2.83 20.49 3889 17.5 4
550.69 1.09 7.94 -6.74 1.19 4.71 -- -- -0.223 1.69 19.64 3881 16.9 6.47
605.55 1.15 8.1 -6.43 -- 3.25 -- -5.76 -0.456 -- 21.1 2304 17.9 4.03
816.73 1.34 7.71 -4 2.4 -- -1.54 -- 0.704 3.04 -- -- -- --
824.56 1.34 7.71 -3.97 2.4 -- -- -- 0.712 3.07 -- -- -- --
592.52 1.13 8 -7 -- 5.57 -- -- -0.343 -- 19.5 3787 16.7 6.21
1215.55 1.63 7.61 -- 2.72 0.837 -- -- 1.06 4.07 12.83 5271 16.8 7.07
1153.29 1.59 7.7 -3.87 -- -- -- -- 0.775 -- -- -- -- --
1239.65 1.65 7.61 -- 2.32 -- -- -- 1.15 3.06 -- -- -- --
1224.55 1.63 7.6 -- -- 2.29 -- -- 1.17 -- 6.865 2282 16.6 7.67
1547.61 1.84 7.6 -- -- -- -- -- 1.2 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 579.16 temperature 20 4320 > th dose independent rect. 18 4
2 580.33 humidity 50 43200 < th dose independent rect. 8 1
3 580.47 temperature 20 4320 < th dose independent rect. 18 4
6 581.82 temperature 20 4320 > th dose independent rect. 17 6
10 582.48 radiation 20 4320 < th dose independent rect. 17 13
11 583.15 humidity 50 43200 > th dose independent rect. 7 2
16 584.63 temperature 20 4320 > th dose independent rect. 18 1
23 586.97 temperature 20 720 > th dose independent rect. 14 17
28 587.50 humidity 50 43200 > th dose independent rect. 20 13
29 587.63 temperature 20 4320 < th dose independent rect. 18 1
30 587.64 humidity 60 43200 < th dose dependent rect. 20 13
39 588.80 temperature 20 720 < th dose independent rect. 14 18
40 589.15 temperature 20 720 < th dose independent sin 13 NA
47 589.65 humidity 50 43200 < th dose independent rect. 21 12
48 589.72 radiation 20 4320 < th dose independent rect. 17 3
56 589.89 wind 9 43200 > th dose independent rect. 2 13
57 589.89 wind 9 43200 > th dose independent rect. 23 16
62 589.99 wind 9 43200 > th dose independent sin 3 NA
67 590.08 wind 9 43200 > th dose independent rect. 4 10
69 590.11 wind 9 43200 > th dose dependent rect. 10 5
87 590.85 humidity 60 43200 < th dose dependent rect. 7 2
96 591.19 wind 9 43200 > th dose dependent rect. 9 8
100 591.47 wind 9 43200 > th dose independent rect. 7 7
102 591.52 wind 9 43200 < th dose independent sin 4 NA
109 591.68 temperature 20 720 > th dose independent rect. 16 21
116 591.83 wind 9 43200 < th dose independent rect. 23 16
117 591.84 temperature 20 720 > th dose independent sin 14 NA
137 592.34 wind 9 43200 < th dose independent rect. 3 11
193 594.16 temperature 20 720 > th dose independent rect. 10 21
201 594.35 radiation 10 4320 < th dose dependent rect. 24 5
202 594.36 wind 9 43200 > th dose dependent rect. 9 11
207 594.44 radiation 10 4320 > th dose dependent rect. 17 14
209 594.47 wind 9 43200 < th dose independent rect. 7 7
242 595.62 wind 7 43200 > th dose dependent sin 4 NA
243 595.62 wind 7 43200 > th dose dependent rect. 4 10
245 595.64 humidity 50 43200 > th dose independent rect. 2 7
265 596.13 temperature 10 43200 < th dose dependent rect. 3 1
269 596.24 wind 7 43200 > th dose dependent rect. 23 16
281 596.44 humidity 60 43200 < th dose dependent rect. 2 7
290 596.62 wind 9 43200 > th dose independent rect. 19 21
291 596.63 wind 9 43200 > th dose independent rect. 9 4
306 596.84 humidity 80 14400 > th dose dependent rect. 5 1
314 596.99 wind 7 43200 > th dose dependent rect. 7 7
325 597.14 wind 9 43200 > th dose independent rect. 10 2
336 597.41 radiation 30 4320 < th dose independent rect. 16 16
356 597.77 wind 9 43200 > th dose dependent sin 22 NA
380 598.14 wind 9 43200 > th dose dependent rect. 21 20
409 598.64 wind 9 43200 > th dose dependent rect. 10 22
415 598.77 temperature 20 1440 < th dose independent rect. 22 21
420 598.81 wind 9 43200 > th dose dependent rect. 4 16
428 598.91 wind 9 43200 > th dose dependent rect. 24 20
444 599.06 wind 9 43200 > th dose dependent rect. 21 23
465 599.32 wind 9 43200 < th dose independent rect. 18 20
481 599.59 temperature 20 1440 < th dose independent rect. 22 18
497 599.72 wind 9 43200 > th dose dependent rect. 9 16
502 599.74 wind 9 43200 > th dose dependent rect. 9 14
504 599.77 temperature 20 1440 > th dose independent rect. 22 21
514 599.88 temperature 20 4320 < th dose independent sin 17 NA
540 600.09 temperature 20 4320 > th dose independent sin 17 NA
566 600.33 wind 7 43200 > th dose dependent rect. 10 2
568 600.38 radiation 20 43200 < th dose independent rect. 24 6
580 600.56 wind 9 43200 > th dose independent rect. 16 22
596 600.84 temperature 20 1440 > th dose independent rect. 22 18
597 600.84 wind 9 43200 > th dose dependent rect. 18 23
601 600.89 wind 9 43200 < th dose independent rect. 9 3
628 601.30 radiation 10 4320 > th dose dependent rect. 6 1
667 601.75 temperature 20 1440 < th dose independent rect. 5 2
719 602.16 radiation 20 4320 < th dose independent rect. 17 10
728 602.23 temperature 20 720 < th dose independent rect. 17 22
735 602.29 wind 9 43200 > th dose independent rect. 13 22
750 602.37 wind 9 43200 > th dose dependent rect. 4 19
753 602.39 wind 9 43200 < th dose independent rect. 16 22
759 602.42 wind 9 43200 > th dose dependent rect. 24 23
775 602.52 wind 9 43200 > th dose dependent rect. 4 22
797 602.61 wind 9 43200 > th dose dependent no NA NA
944 603.38 temperature 20 1440 > th dose independent rect. 6 1
987 603.73 wind 9 43200 > th dose independent no NA NA
992 603.77 temperature 20 720 > th dose independent no NA NA
996 603.79 wind 9 43200 > th dose independent rect. 1 23