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Os09g0410300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0129) R2 : 0.845
β1 : -0.787 (0.0471) R2dD : 0.0986 R2D : 0.0803
β2 : 1.51 (0.0323) R2dC : 0.75 R2C : 0.735
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.219 (0.0274) R2dN8 : 0.029 R2N8 : -0.00326
σ : 0.242
deviance : 26.64
__
_____
C
peak time of C : 8.52
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.92 0.235 11.6 -0.576 1.4 -0.216 0.322 0.577 -0.0939 8.55 25.2 614 -- --
25.85 0.237 11.6 -0.674 1.38 -0.21 0.398 -- -0.125 8.58 25.29 611 -- --
25.21 0.234 11.6 -0.603 1.4 -0.206 -- 0.509 -0.0932 8.57 25.52 588 -- --
25.46 0.235 11.6 -0.722 1.41 -0.197 -- -- -0.14 8.55 25.19 595 -- --
131.18 0.533 11.7 -0.412 -- -0.763 -- 0.7 0.0976 -- 27.3 913 -- --
26.57 0.242 11.7 -0.792 1.51 -- 0.143 -- -0.219 8.52 -- -- -- --
26.64 0.242 11.7 -0.787 1.51 -- -- -- -0.219 8.52 -- -- -- --
100.52 0.467 11.6 -0.465 -- -1.06 -- -- 0.102 -- 25.94 633 -- --
39.21 0.292 11.6 -- 1.43 -0.236 -- -- -0.0547 8.55 25 620 -- --
154.82 0.581 11.7 -0.781 -- -- -- -- -0.205 -- -- -- -- --
42.98 0.307 11.6 -- 1.51 -- -- -- -0.131 8.56 -- -- -- --
105.96 0.479 11.6 -- -- -1.13 -- -- 0.173 -- 26 637 -- --
170.92 0.61 11.7 -- -- -- -- -- -0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.28 temperature 20.0 10 > th dose dependent rect. 16 13
16 23.97 temperature 30.0 270 < th dose dependent rect. 12 11
19 24.00 temperature 20.0 270 > th dose dependent rect. 14 13
21 24.04 temperature 20.0 90 > th dose dependent sin 14 NA
24 24.04 radiation 10.0 30 < th dose dependent rect. 24 15
35 24.11 temperature 20.0 10 > th dose dependent sin 13 NA
51 24.19 radiation 20.0 30 < th dose dependent rect. 24 11
55 24.21 radiation 1.0 1440 > th dose independent rect. 11 1
57 24.22 temperature 25.0 720 > th dose dependent rect. 16 1
58 24.22 temperature 15.0 270 > th dose dependent rect. 11 15
81 24.28 temperature 25.0 720 > th dose independent rect. 16 2
82 24.28 temperature 25.0 270 < th dose independent rect. 14 8
83 24.28 temperature 20.0 10 > th dose independent rect. 16 13
100 24.31 radiation 10.0 10 < th dose dependent rect. 24 17
121 24.36 temperature 25.0 270 > th dose independent rect. 11 15
138 24.38 temperature 25.0 10 > th dose independent rect. 5 6
150 24.41 temperature 20.0 10 > th dose dependent rect. 14 15
152 24.42 radiation 10.0 30 < th dose independent rect. 24 15
153 24.42 temperature 30.0 270 < th dose dependent rect. 17 5
161 24.43 temperature 30.0 720 < th dose dependent rect. 13 2
163 24.43 temperature 30.0 10 < th dose dependent rect. 15 9
170 24.44 temperature 20.0 30 > th dose dependent rect. 16 16
172 24.45 wind 9.0 4320 > th dose dependent rect. 13 1
182 24.46 wind 9.0 30 < th dose independent rect. 11 23
214 24.51 radiation 20.0 10 > th dose independent rect. 10 1
216 24.51 temperature 20.0 10 > th dose independent rect. 24 5
218 24.51 temperature 15.0 30 > th dose independent rect. 11 23
220 24.51 atmosphere 1005.0 30 > th dose dependent rect. 10 1
231 24.51 radiation 10.0 10 < th dose dependent rect. 24 19
236 24.53 wind 1.0 30 < th dose independent rect. 10 1
237 24.53 temperature 25.0 30 > th dose independent rect. 10 1
238 24.53 temperature 10.0 1440 > th dose independent rect. 11 1
242 24.53 atmosphere 995.0 1440 > th dose independent rect. 11 1
246 24.53 precipitation 0.1 1440 < th dose independent rect. 11 1
249 24.53 temperature 10.0 1440 > th dose independent rect. 12 23
253 24.53 wind 1.0 30 < th dose dependent rect. 10 1
255 24.53 radiation 1.0 30 > th dose dependent rect. 10 1
257 24.53 precipitation 0.1 1440 < th dose dependent rect. 11 1
264 24.54 temperature 30.0 30 < th dose independent rect. 10 1
265 24.54 atmosphere 1005.0 30 > th dose independent rect. 10 1
268 24.54 temperature 25.0 270 > th dose independent rect. 13 14
278 24.55 wind 9.0 30 < th dose independent rect. 10 1
279 24.55 humidity 60.0 30 > th dose independent rect. 10 1
281 24.55 radiation 10.0 30 < th dose independent rect. 24 11
285 24.55 wind 1.0 30 > th dose dependent rect. 10 1
290 24.56 wind 1.0 30 > th dose independent rect. 10 1
291 24.56 wind 5.0 30 < th dose independent rect. 10 1
294 24.56 temperature 10.0 30 > th dose independent rect. 10 1
297 24.56 temperature 20.0 270 > th dose independent rect. 24 1
299 24.56 humidity 90.0 30 < th dose independent rect. 10 1
300 24.56 atmosphere 995.0 30 > th dose independent rect. 10 1
302 24.56 atmosphere 1015.0 30 < th dose independent rect. 10 1
305 24.56 precipitation 0.1 30 < th dose independent rect. 10 1
306 24.56 temperature 20.0 90 > th dose independent rect. 24 4
309 24.56 temperature 20.0 10 > th dose independent rect. 14 15
311 24.56 precipitation 0.1 30 < th dose independent rect. 11 23
312 24.56 temperature 10.0 30 > th dose dependent rect. 10 1
315 24.56 humidity 50.0 30 > th dose dependent rect. 10 1
316 24.56 precipitation 0.1 30 < th dose dependent rect. 10 1
321 24.56 precipitation 0.1 30 < th dose dependent rect. 11 23
322 24.57 humidity 70.0 30 < th dose independent rect. 10 1
326 24.57 radiation 30.0 30 < th dose independent rect. 10 1
331 24.57 wind 7.0 30 < th dose dependent rect. 10 1
334 24.57 humidity 80.0 30 < th dose dependent rect. 10 1
345 24.58 temperature 25.0 10 > th dose independent rect. 1 10
354 24.58 temperature 30.0 10 < th dose dependent rect. 19 5
366 24.59 temperature 30.0 270 < th dose dependent rect. 19 1
371 24.60 atmosphere 1000.0 270 > th dose independent rect. 23 4
372 24.60 atmosphere 1000.0 10 > th dose independent rect. 24 5
380 24.60 temperature 30.0 270 < th dose dependent sin 18 NA
384 24.60 radiation 1.0 270 < th dose dependent rect. 13 9
399 24.61 radiation 10.0 270 > th dose independent rect. 6 1
405 24.61 atmosphere 1000.0 270 > th dose independent rect. 22 6
447 24.63 atmosphere 1015.0 30 < th dose dependent rect. 10 1
479 24.64 radiation 10.0 10 < th dose dependent rect. 24 21
490 24.65 radiation 40.0 30 < th dose dependent rect. 10 1
496 24.66 atmosphere 1000.0 270 > th dose independent rect. 24 1
497 24.66 radiation 1.0 270 < th dose independent rect. 13 9
498 24.66 temperature 25.0 720 > th dose independent rect. 9 10
528 24.67 radiation 10.0 30 < th dose dependent sin 4 NA
601 24.70 radiation 1.0 30 < th dose independent rect. 24 8
618 24.71 temperature 25.0 270 > th dose independent sin 17 NA
628 24.71 temperature 20.0 30 > th dose dependent rect. 5 6
644 24.72 radiation 10.0 30 < th dose independent rect. 24 17
650 24.72 temperature 15.0 90 > th dose dependent rect. 24 4
692 24.75 temperature 25.0 270 < th dose independent rect. 19 1
716 24.76 radiation 20.0 30 < th dose dependent sin 7 NA
728 24.77 temperature 25.0 270 < th dose independent sin 18 NA
733 24.77 temperature 25.0 10 < th dose independent rect. 1 9
744 24.77 temperature 15.0 270 > th dose dependent rect. 24 1
759 24.77 radiation 10.0 10 < th dose dependent rect. 22 23
773 24.78 temperature 30.0 10 < th dose dependent rect. 17 7
774 24.78 temperature 20.0 720 > th dose dependent rect. 11 8
812 24.80 temperature 25.0 720 > th dose independent rect. 23 20
830 24.81 temperature 15.0 10 > th dose dependent rect. 24 5
847 24.82 radiation 1.0 30 < th dose independent rect. 24 6
879 24.83 radiation 10.0 30 > th dose independent rect. 6 5
899 24.83 atmosphere 1000.0 30 > th dose independent rect. 11 23