Os09g0407700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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Os09g0407700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.99 | 0.278 | 12.2 | -1.06 | 0.936 | -0.552 | 0.00806 | 0.206 | -0.654 | 9.01 | 70.01 | 1178 | -- | -- |
| 35.07 | 0.276 | 12.2 | -1.03 | 0.936 | -0.542 | 0.0508 | -- | -0.65 | 8.99 | 70.84 | 1178 | -- | -- |
| 34.99 | 0.276 | 12.2 | -1.06 | 0.936 | -0.552 | -- | 0.209 | -0.654 | 9.01 | 70.01 | 1178 | -- | -- |
| 35.08 | 0.276 | 12.2 | -1.03 | 0.936 | -0.539 | -- | -- | -0.645 | 9 | 70.76 | 1178 | -- | -- |
| 75.77 | 0.405 | 12.2 | -1.02 | -- | -0.503 | -- | 0.127 | -0.651 | -- | 71 | 1442 | -- | -- |
| 45.05 | 0.315 | 12.2 | -0.911 | 0.847 | -- | -0.0273 | -- | -0.574 | 8.48 | -- | -- | -- | -- |
| 45.06 | 0.314 | 12.2 | -0.912 | 0.847 | -- | -- | -- | -0.574 | 8.48 | -- | -- | -- | -- |
| 75.8 | 0.406 | 12.2 | -1.01 | -- | -0.494 | -- | -- | -0.648 | -- | 71.62 | 1441 | -- | -- |
| 48.19 | 0.323 | 12.2 | -- | 0.809 | -0.843 | -- | -- | -0.663 | 8.06 | 63 | 30686 | -- | -- |
| 85.14 | 0.431 | 12.2 | -0.908 | -- | -- | -- | -- | -0.565 | -- | -- | -- | -- | -- |
| 66.97 | 0.383 | 12.1 | -- | 0.843 | -- | -- | -- | -0.472 | 8.56 | -- | -- | -- | -- |
| 87.25 | 0.435 | 12.1 | -- | -- | -0.851 | -- | -- | -0.372 | -- | 59.06 | 47520 | -- | -- |
| 106.89 | 0.483 | 12.2 | -- | -- | -- | -- | -- | -0.465 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.27 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 2 | 33.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 3 | 33.38 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 4 | 33.42 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 13 | 34.14 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 15 | 34.15 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 18 | 34.24 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 31 | 34.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 40 | 34.67 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 45 | 34.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 49 | 34.73 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 64 | 34.79 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 67 | 34.82 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 69 | 34.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 75 | 34.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 83 | 34.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 109 | 35.04 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 112 | 35.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 151 | 35.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 167 | 35.21 | humidity | 90 | 1440 | < th | dose dependent | sin | 3 | NA |
| 210 | 35.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 10 |
| 319 | 35.62 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 348 | 35.71 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 371 | 35.77 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 382 | 35.81 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 407 | 35.85 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 421 | 35.87 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 433 | 35.90 | wind | 1 | 14400 | > th | dose independent | sin | 8 | NA |
| 496 | 36.01 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 498 | 36.01 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 571 | 36.12 | humidity | 60 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 572 | 36.12 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 653 | 36.23 | humidity | 60 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 658 | 36.24 | wind | 1 | 14400 | < th | dose independent | sin | 8 | NA |
| 816 | 36.34 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 12 |
| 865 | 36.38 | humidity | 60 | 4320 | > th | dose independent | sin | 7 | NA |
| 889 | 36.39 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 903 | 36.40 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 20 |