Os09g0394100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Malonyl-CoA decarboxylase family protein.
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Os09g0394100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Malonyl-CoA decarboxylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.24 | 0.25 | 9.75 | -0.282 | 0.957 | -20.6 | 0.303 | -45.5 | 0.0295 | 6.6 | 15.01 | 1374 | -- | -- |
| 29.64 | 0.256 | 9.48 | -0.798 | 0.96 | 0.824 | 0.276 | -- | 0.045 | 6.55 | 15.01 | 1374 | -- | -- |
| 28.47 | 0.249 | 9.76 | -0.275 | 0.958 | -20.6 | -- | -45.4 | 0.0292 | 6.6 | 15.01 | 1364 | -- | -- |
| 28.75 | 0.25 | 9.48 | -0.852 | 0.953 | 0.884 | -- | -- | 0.029 | 6.57 | 14.95 | 1341 | -- | -- |
| 76.22 | 0.407 | 9.77 | -0.275 | -- | -20.2 | -- | -44.8 | 0.0438 | -- | 15.08 | 1373 | -- | -- |
| 30.95 | 0.261 | 9.47 | -0.766 | 0.962 | -- | 0.25 | -- | 0.0532 | 6.6 | -- | -- | -- | -- |
| 31.11 | 0.261 | 9.48 | -0.763 | 0.963 | -- | -- | -- | 0.0524 | 6.6 | -- | -- | -- | -- |
| 76.09 | 0.406 | 9.5 | -0.857 | -- | 1.05 | -- | -- | 0.0417 | -- | 15.1 | 1347 | -- | -- |
| 45.99 | 0.316 | 9.46 | -- | 0.953 | 0.407 | -- | -- | 0.133 | 6.64 | 15.03 | 363 | -- | -- |
| 79.45 | 0.416 | 9.49 | -0.74 | -- | -- | -- | -- | 0.072 | -- | -- | -- | -- | -- |
| 46.44 | 0.319 | 9.46 | -- | 0.954 | -- | -- | -- | 0.137 | 6.65 | -- | -- | -- | -- |
| 93.31 | 0.45 | 9.48 | -- | -- | 0.503 | -- | -- | 0.15 | -- | 14.9 | 317 | -- | -- |
| 93.87 | 0.452 | 9.48 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 12 | 27.02 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 16 | 27.05 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 21 | 27.09 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 21 |
| 22 | 27.11 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 6 |
| 29 | 27.14 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 30 | 27.14 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 33 | 27.16 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 13 |
| 44 | 27.26 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 45 | 27.26 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 50 | 27.29 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 11 |
| 56 | 27.31 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 64 | 27.35 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 82 | 27.38 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 88 | 27.42 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 90 | 27.42 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 91 | 27.43 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 105 | 27.50 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 23 |
| 112 | 27.53 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 113 | 27.53 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 117 | 27.55 | humidity | 90.0 | 720 | < th | dose independent | rect. | 8 | 9 |
| 124 | 27.57 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 19 |
| 132 | 27.61 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 154 | 27.65 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 155 | 27.65 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 21 |
| 157 | 27.65 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 159 | 27.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 12 |
| 163 | 27.66 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 166 | 27.66 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 167 | 27.66 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 201 | 27.72 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 204 | 27.72 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 6 |
| 205 | 27.72 | temperature | 15.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 213 | 27.73 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 223 | 27.74 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 8 |
| 241 | 27.78 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 352 | 27.93 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 5 |
| 364 | 27.94 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 370 | 27.94 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 373 | 27.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 381 | 27.96 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 6 |
| 386 | 27.96 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 392 | 27.97 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 9 |
| 433 | 28.01 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 441 | 28.01 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 1 | NA |
| 446 | 28.02 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 448 | 28.02 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 450 | 28.02 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 11 |
| 453 | 28.02 | temperature | 15.0 | 720 | > th | dose independent | rect. | 13 | 22 |
| 464 | 28.03 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 470 | 28.03 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 5 |
| 497 | 28.05 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 520 | 28.06 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 540 | 28.07 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 16 |
| 587 | 28.10 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 19 |
| 599 | 28.11 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 3 |
| 606 | 28.11 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 607 | 28.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 3 |
| 624 | 28.13 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 625 | 28.13 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 629 | 28.13 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 635 | 28.14 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 12 |
| 662 | 28.16 | precipitation | 0.1 | 720 | > th | dose independent | sin | 1 | NA |
| 672 | 28.16 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 23 |
| 680 | 28.17 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 683 | 28.17 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 15 |
| 697 | 28.18 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 701 | 28.18 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 708 | 28.18 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 714 | 28.18 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 721 | 28.18 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 800 | 28.22 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 823 | 28.24 | temperature | 15.0 | 1440 | > th | dose independent | no | NA | NA |
| 825 | 28.24 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 831 | 28.24 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 1 | 15 |
| 870 | 28.25 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 877 | 28.26 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 895 | 28.26 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 16 |
| 902 | 28.26 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 924 | 28.27 | temperature | 20.0 | 90 | < th | dose dependent | sin | 19 | NA |
| 926 | 28.27 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 968 | 28.28 | temperature | 15.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 970 | 28.28 | temperature | 15.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 994 | 28.28 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 10 |