Os09g0390400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0390400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.36 | 0.513 | 10.6 | -1.16 | 0.142 | 1.14 | -0.607 | 2.18 | -0.761 | 13.3 | 0.9973 | 4529 | -- | -- |
| 122.72 | 0.516 | 10.5 | -1.06 | 0.137 | 1.52 | -0.782 | -- | -0.733 | 12.9 | 1 | 2424 | -- | -- |
| 120.86 | 0.512 | 10.6 | -1.18 | 0.143 | 1.12 | -- | 2.18 | -0.76 | 13.4 | 1 | 4529 | -- | -- |
| 124.6 | 0.52 | 10.5 | -1.13 | 0.136 | 1.49 | -- | -- | -0.74 | 13.4 | 1 | 2424 | -- | -- |
| 122.12 | 0.515 | 10.6 | -1.19 | -- | 1.12 | -- | 2.2 | -0.766 | -- | 1 | 4529 | -- | -- |
| 156.46 | 0.586 | 10.5 | -1.55 | 0.155 | -- | -0.415 | -- | -0.641 | 13.2 | -- | -- | -- | -- |
| 157.15 | 0.587 | 10.5 | -1.56 | 0.158 | -- | -- | -- | -0.642 | 13.7 | -- | -- | -- | -- |
| 125.69 | 0.522 | 10.5 | -1.1 | -- | 1.57 | -- | -- | -0.752 | -- | 1 | 2260 | -- | -- |
| 153 | 0.576 | 10.5 | -- | 0.116 | 2.06 | -- | -- | -0.666 | 12.9 | 0.5687 | 2260 | -- | -- |
| 158.67 | 0.589 | 10.5 | -1.57 | -- | -- | -- | -- | -0.646 | -- | -- | -- | -- | -- |
| 221.56 | 0.696 | 10.5 | -- | 0.187 | -- | -- | -- | -0.468 | 13.9 | -- | -- | -- | -- |
| 153.87 | 0.578 | 10.5 | -- | -- | 2.08 | -- | -- | -0.672 | -- | 0.5779 | 2260 | -- | -- |
| 223.66 | 0.698 | 10.5 | -- | -- | -- | -- | -- | -0.472 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 6 | 115.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 7 | 115.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 8 | 115.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 9 | 115.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 11 | 115.66 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 13 | 115.66 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 18 | 115.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 19 | 115.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 20 | 115.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 21 | 116.02 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 22 | 116.05 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 23 | 116.05 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 24 | 116.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 37 | 116.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 39 | 116.53 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 40 | 116.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 41 | 116.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 42 | 116.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 43 | 116.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 46 | 116.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 47 | 116.63 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 52 | 116.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 53 | 116.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 58 | 116.75 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 68 | 116.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 78 | 117.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 80 | 117.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 82 | 117.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 84 | 117.08 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 87 | 117.08 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 90 | 117.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 91 | 117.12 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 95 | 117.17 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 102 | 117.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 105 | 117.21 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 106 | 117.21 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 114 | 117.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 115 | 117.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 130 | 117.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 146 | 117.49 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 158 | 117.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 168 | 117.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 180 | 117.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 189 | 117.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 190 | 117.76 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 197 | 117.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 213 | 117.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 239 | 118.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 261 | 118.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 263 | 118.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 264 | 118.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 270 | 118.17 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 288 | 118.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 300 | 118.30 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 301 | 118.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 332 | 118.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 349 | 118.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 350 | 118.47 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 357 | 118.49 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 490 | 118.88 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 491 | 118.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 511 | 118.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 514 | 118.94 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 529 | 118.96 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 540 | 118.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 598 | 119.12 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 658 | 119.23 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 661 | 119.23 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 663 | 119.24 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 664 | 119.24 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 667 | 119.24 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 702 | 119.28 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 714 | 119.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 719 | 119.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 747 | 119.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 757 | 119.37 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 762 | 119.38 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 805 | 119.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 863 | 119.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 904 | 119.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 948 | 119.76 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 969 | 119.79 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 982 | 119.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |