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Os09g0382500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0129) R2 : 0.00268
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.03 (0.0271) R2dN8 : 0.00346 R2N8 : 0.00268
σ : 0.243
deviance : 27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.54 0.173 12.8 0.725 0.0849 0.297 -0.164 -0.0181 0.144 0.286 24.8 1381 -- --
13.53 0.171 12.8 0.719 0.0858 0.291 -0.163 -- 0.143 0.3 24.67 1366 -- --
13.65 0.172 12.8 0.726 0.0865 0.293 -- -0.00235 0.143 0.261 24.6 1366 -- --
13.64 0.172 12.8 0.726 0.0867 0.292 -- -- 0.143 0.23 24.62 1366 -- --
14.04 0.175 12.8 0.719 -- 0.275 -- 0.0174 0.141 -- 24.4 1411 -- --
16.23 0.189 12.8 0.619 0.064 -- -0.167 -- 0.0385 23.2 -- -- -- --
16.35 0.189 12.8 0.626 0.0656 -- -- -- 0.0393 22.7 -- -- -- --
13.86 0.173 12.8 0.751 -- 0.254 -- -- 0.142 -- 23.11 1544 -- --
26.03 0.238 12.8 -- 0.0862 0.112 -- -- 0.002 23 22.4 642 -- --
16.61 0.19 12.8 0.628 -- -- -- -- 0.0396 -- -- -- -- --
26.68 0.242 12.8 -- 0.071 -- -- -- -0.0305 23.3 -- -- -- --
26.46 0.24 12.8 -- -- 0.0987 -- -- 7.27e-05 -- 22.36 522 -- --
27 0.243 12.8 -- -- -- -- -- -0.03 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.73 wind 9.0 43200 > th dose independent rect. 18 3
2 12.74 wind 9.0 43200 < th dose independent rect. 18 3
3 12.74 wind 9.0 43200 > th dose dependent rect. 18 3
4 12.75 wind 9.0 43200 > th dose dependent rect. 18 12
9 12.83 wind 9.0 43200 > th dose dependent rect. 18 6
19 13.09 temperature 20.0 1440 > th dose dependent rect. 3 1
20 13.09 temperature 20.0 1440 > th dose dependent rect. 23 6
35 13.13 wind 9.0 43200 > th dose independent rect. 18 10
40 13.14 wind 1.0 43200 < th dose dependent rect. 20 1
41 13.14 temperature 20.0 1440 > th dose dependent rect. 24 1
59 13.16 temperature 20.0 1440 > th dose dependent rect. 20 9
74 13.19 wind 7.0 43200 > th dose independent rect. 20 1
86 13.20 temperature 20.0 720 > th dose dependent rect. 19 17
106 13.26 wind 7.0 43200 < th dose independent rect. 20 1
107 13.26 temperature 20.0 1440 > th dose dependent rect. 20 1
117 13.27 precipitation 0.1 43200 > th dose dependent rect. 17 1
132 13.29 temperature 20.0 4320 > th dose independent rect. 20 4
156 13.31 temperature 25.0 4320 < th dose independent rect. 19 1
157 13.31 temperature 20.0 1440 > th dose dependent sin 11 NA
183 13.34 radiation 1.0 43200 < th dose dependent rect. 20 5
190 13.35 temperature 20.0 720 > th dose dependent sin 8 NA
198 13.36 temperature 25.0 4320 > th dose independent rect. 19 1
211 13.36 temperature 10.0 720 > th dose dependent rect. 19 17
222 13.38 wind 9.0 43200 < th dose independent rect. 18 10
223 13.38 temperature 25.0 1440 > th dose independent rect. 15 14
230 13.39 atmosphere 995.0 43200 > th dose independent rect. 12 1
278 13.42 wind 9.0 43200 < th dose independent rect. 18 13
293 13.42 temperature 30.0 720 < th dose dependent rect. 20 13
299 13.43 temperature 25.0 4320 < th dose independent rect. 19 7
320 13.44 radiation 1.0 43200 < th dose dependent rect. 22 4
322 13.44 temperature 30.0 1440 < th dose dependent rect. 17 12
328 13.45 temperature 25.0 4320 > th dose independent rect. 19 7
355 13.46 radiation 1.0 43200 < th dose dependent rect. 1 1
356 13.46 radiation 1.0 43200 < th dose dependent rect. 23 1
385 13.47 temperature 25.0 1440 < th dose independent rect. 14 17
387 13.47 temperature 10.0 1440 > th dose dependent rect. 20 1
389 13.47 temperature 25.0 1440 < th dose dependent rect. 18 1
411 13.47 temperature 25.0 720 < th dose dependent rect. 3 21
412 13.48 temperature 25.0 1440 > th dose independent sin 14 NA
474 13.49 temperature 30.0 1440 < th dose dependent rect. 20 1
477 13.49 temperature 30.0 1440 < th dose dependent rect. 18 3
538 13.51 temperature 25.0 4320 < th dose independent sin 13 NA
559 13.51 temperature 30.0 1440 < th dose dependent rect. 3 1
570 13.51 temperature 30.0 4320 < th dose dependent rect. 20 6
625 13.52 temperature 30.0 1440 < th dose dependent rect. 23 6
670 13.53 temperature 30.0 1440 < th dose dependent rect. 1 1
683 13.53 temperature 30.0 1440 < th dose dependent rect. 1 4
806 13.55 precipitation 0.1 43200 > th dose independent rect. 17 1
807 13.55 precipitation 0.1 43200 < th dose independent rect. 17 1
826 13.55 temperature 30.0 720 < th dose dependent sin 10 NA
827 13.55 temperature 30.0 1440 < th dose dependent sin 12 NA
833 13.55 precipitation 0.1 43200 < th dose dependent rect. 17 1