Os09g0381800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os09g0381800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.47 | 0.522 | 3.45 | -0.253 | 0.218 | -0.621 | -0.912 | 4.28 | -0.0802 | 4.74 | 1.062 | 51 | -- | -- |
| 132.32 | 0.54 | 3.41 | -0.0767 | 0.302 | -0.0456 | -1.27 | -- | -0.0749 | 4.54 | 1.062 | 51 | -- | -- |
| 125.53 | 0.522 | 3.45 | -0.262 | 0.216 | -0.633 | -- | 4.7 | -0.078 | 4.92 | 1.067 | 50 | -- | -- |
| 136.42 | 0.548 | 3.4 | -0.07 | 0.301 | -0.113 | -- | -- | -0.0642 | 4.98 | 0.7812 | 67 | -- | -- |
| 127.5 | 0.526 | 3.45 | -0.279 | -- | -0.82 | -- | 5.03 | -0.0688 | -- | 1.011 | 51 | -- | -- |
| 132.39 | 0.539 | 3.41 | -0.0716 | 0.316 | -- | -1.26 | -- | -0.0756 | 4.54 | -- | -- | -- | -- |
| 136.59 | 0.547 | 3.41 | -0.0625 | 0.312 | -- | -- | -- | -0.0689 | 4.94 | -- | -- | -- | -- |
| 139.37 | 0.55 | 3.41 | -0.111 | -- | -0.201 | -- | -- | -0.0647 | -- | 1.9 | 93 | -- | -- |
| 136.55 | 0.547 | 3.4 | -- | 0.301 | -0.104 | -- | -- | -0.0569 | 4.99 | 0.8 | 67 | -- | -- |
| 141.71 | 0.556 | 3.41 | -0.0511 | -- | -- | -- | -- | -0.0609 | -- | -- | -- | -- | -- |
| 136.69 | 0.547 | 3.4 | -- | 0.311 | -- | -- | -- | -0.0619 | 4.95 | -- | -- | -- | -- |
| 139.69 | 0.55 | 3.4 | -- | -- | -0.193 | -- | -- | -0.0422 | -- | 1.972 | 97 | -- | -- |
| 141.78 | 0.556 | 3.41 | -- | -- | -- | -- | -- | -0.0552 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.01 | wind | 1.0 | 90 | < th | dose independent | rect. | 23 | 5 |
| 2 | 114.40 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 6 | 114.42 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 51 | 114.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 52 | 114.77 | wind | 1.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 53 | 114.81 | wind | 1.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 60 | 114.89 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 13 |
| 70 | 115.53 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 73 | 116.03 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 75 | 116.13 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 85 | 116.74 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 119 | 117.50 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 131 | 117.64 | wind | 1.0 | 90 | < th | dose dependent | rect. | 23 | 5 |
| 132 | 117.68 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 143 | 117.96 | wind | 1.0 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 157 | 118.13 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 13 |
| 160 | 118.17 | precipitation | 0.1 | 30 | < th | dose independent | sin | 3 | NA |
| 161 | 118.17 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 3 | NA |
| 164 | 118.19 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 3 | NA |
| 168 | 118.26 | precipitation | 0.1 | 30 | > th | dose independent | sin | 3 | NA |
| 202 | 118.78 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 229 | 119.12 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 233 | 119.18 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 268 | 119.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 369 | 120.00 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 381 | 120.16 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 21 |
| 393 | 120.25 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 4 | 22 |
| 404 | 120.32 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 420 | 120.56 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 4 |
| 439 | 120.62 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 534 | 120.88 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 540 | 120.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 21 |
| 541 | 120.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 21 |
| 567 | 121.10 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 569 | 121.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 570 | 121.10 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 573 | 121.10 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 574 | 121.10 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 576 | 121.10 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 581 | 121.10 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 21 |
| 583 | 121.10 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 590 | 121.12 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 591 | 121.14 | wind | 1.0 | 90 | > th | dose independent | rect. | 21 | 14 |
| 594 | 121.17 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 608 | 121.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 3 |
| 609 | 121.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 622 | 121.31 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 640 | 121.37 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 642 | 121.37 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 22 |
| 643 | 121.37 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 644 | 121.38 | wind | 7.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 649 | 121.38 | wind | 1.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 660 | 121.40 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 690 | 121.49 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 691 | 121.49 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 694 | 121.49 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 698 | 121.49 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 700 | 121.49 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 706 | 121.49 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 22 |
| 708 | 121.49 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 719 | 121.50 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 10 |
| 722 | 121.54 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 21 |
| 731 | 121.57 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 735 | 121.59 | wind | 1.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 749 | 121.65 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 21 |
| 752 | 121.66 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 753 | 121.66 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 756 | 121.67 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 773 | 121.74 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 10 |
| 791 | 121.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 21 |
| 815 | 121.87 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 2 |
| 817 | 121.87 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 841 | 121.92 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 925 | 122.08 | wind | 1.0 | 90 | > th | dose independent | sin | 16 | NA |
| 956 | 122.13 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 22 |