Os09g0372800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os09g0372800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.71 | 0.296 | 8.8 | -0.719 | 0.911 | 1.04 | -0.514 | -1.04 | -0.124 | 5.35 | 19 | 365 | -- | -- |
| 39.86 | 0.294 | 8.78 | -0.546 | 0.859 | 1.15 | -0.285 | -- | -0.0733 | 5.68 | 15.57 | 472 | -- | -- |
| 40.09 | 0.295 | 8.79 | -0.606 | 0.897 | 1.12 | -- | -0.392 | -0.0863 | 5.33 | 16.97 | 387 | -- | -- |
| 40.06 | 0.295 | 8.78 | -0.55 | 0.873 | 1.16 | -- | -- | -0.0729 | 5.64 | 15.79 | 462 | -- | -- |
| 53.3 | 0.34 | 8.8 | -0.681 | -- | 0.966 | -- | -0.168 | -0.0851 | -- | 11.68 | 2698 | -- | -- |
| 56.46 | 0.352 | 8.74 | -0.277 | 0.547 | -- | -0.496 | -- | 0.107 | 5.3 | -- | -- | -- | -- |
| 57.07 | 0.354 | 8.74 | -0.278 | 0.543 | -- | -- | -- | 0.109 | 5.21 | -- | -- | -- | -- |
| 53.31 | 0.34 | 8.79 | -0.639 | -- | 0.922 | -- | -- | -0.0757 | -- | 16.1 | 2712 | -- | -- |
| 47.16 | 0.32 | 8.76 | -- | 0.831 | 0.911 | -- | -- | 0.000246 | 5.49 | 17.1 | 406 | -- | -- |
| 72.5 | 0.398 | 8.75 | -0.259 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 59.1 | 0.36 | 8.74 | -- | 0.538 | -- | -- | -- | 0.14 | 5.23 | -- | -- | -- | -- |
| 61.72 | 0.366 | 8.77 | -- | -- | 0.575 | -- | -- | 0.0466 | -- | 21.2 | 2700 | -- | -- |
| 74.26 | 0.402 | 8.74 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 7 | 38.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 19 | 38.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 36 | 38.51 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 44 | 38.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 124 | 38.82 | temperature | 15 | 1440 | > th | dose dependent | sin | 8 | NA |
| 130 | 38.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 195 | 38.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 216 | 38.97 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 255 | 39.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 443 | 39.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 639 | 39.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 745 | 40.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 801 | 40.09 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 11 |
| 812 | 40.11 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 815 | 40.11 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 8 |
| 837 | 40.13 | temperature | 20 | 4320 | > th | dose dependent | sin | 18 | NA |