Os09g0363700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0363700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.84 | 0.43 | 9.72 | -0.687 | 0.398 | -0.169 | 0.203 | -5.15 | -0.419 | 13.6 | 29.85 | 3763 | -- | -- |
| 87.42 | 0.435 | 9.89 | -1.52 | 0.323 | -0.552 | -0.0185 | -- | -0.885 | 12 | 30.4 | 18843 | -- | -- |
| 83.99 | 0.427 | 9.72 | -0.694 | 0.397 | -0.176 | -- | -5.06 | -0.419 | 13.4 | 29.8 | 3759 | -- | -- |
| 84.17 | 0.427 | 9.93 | -1.65 | 0.329 | -0.745 | -- | -- | -0.918 | 12.4 | 31.2 | 13082 | -- | -- |
| 92.57 | 0.448 | 9.74 | -0.793 | -- | -0.219 | -- | -3.79 | -0.433 | -- | 29.8 | 4912 | -- | -- |
| 104.55 | 0.479 | 9.84 | -1.36 | 0.331 | -- | 0.0361 | -- | -0.572 | 13.5 | -- | -- | -- | -- |
| 104.56 | 0.479 | 9.84 | -1.36 | 0.331 | -- | -- | -- | -0.572 | 13.4 | -- | -- | -- | -- |
| 90.92 | 0.444 | 9.92 | -1.67 | -- | -0.686 | -- | -- | -0.922 | -- | 30.94 | 13180 | -- | -- |
| 145 | 0.561 | 9.78 | -- | 0.286 | -0.384 | -- | -- | -0.354 | 13.2 | 30.4 | 5857 | -- | -- |
| 111.29 | 0.493 | 9.84 | -1.37 | -- | -- | -- | -- | -0.579 | -- | -- | -- | -- | -- |
| 153.41 | 0.579 | 9.8 | -- | 0.355 | -- | -- | -- | -0.42 | 13.5 | -- | -- | -- | -- |
| 152.46 | 0.575 | 9.79 | -- | -- | -0.434 | -- | -- | -0.365 | -- | 30.3 | 5995 | -- | -- |
| 161.13 | 0.592 | 9.81 | -- | -- | -- | -- | -- | -0.426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 3 | 79.34 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 16 | 80.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 22 | 80.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 30 | 80.57 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 42 | 80.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 44 | 80.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 45 | 80.82 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 46 | 80.83 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 48 | 80.86 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 49 | 80.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 51 | 80.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 53 | 80.93 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 57 | 80.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 59 | 80.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 62 | 81.00 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 63 | 81.00 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 82 | 81.05 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 83 | 81.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 93 | 81.14 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 104 | 81.21 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 105 | 81.22 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 107 | 81.24 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 158 | 81.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 159 | 81.54 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 161 | 81.54 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 163 | 81.55 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 169 | 81.60 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 173 | 81.64 | humidity | 80.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 181 | 81.68 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 186 | 81.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 188 | 81.72 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 196 | 81.76 | humidity | 80.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 220 | 81.83 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 226 | 81.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 228 | 81.85 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 232 | 81.88 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 247 | 81.93 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 249 | 81.94 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 250 | 81.94 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 267 | 81.99 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 9 |
| 309 | 82.03 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 350 | 82.08 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 361 | 82.09 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 373 | 82.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 395 | 82.14 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 427 | 82.23 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 476 | 82.38 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 505 | 82.45 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 523 | 82.46 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 560 | 82.49 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 609 | 82.54 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 610 | 82.54 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 627 | 82.57 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 637 | 82.58 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 677 | 82.66 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 693 | 82.70 | temperature | 15.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 728 | 82.75 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 729 | 82.75 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 770 | 82.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 806 | 82.83 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 825 | 82.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 870 | 82.90 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 933 | 82.97 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 949 | 83.00 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 5 |
| 952 | 83.00 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 953 | 83.00 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 972 | 83.02 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 981 | 83.03 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 985 | 83.03 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 994 | 83.04 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 997 | 83.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 1 | 20 |