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Os09g0357500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.07 (0.0376) R2 : 0.395
β1 : 0.856 (0.145) R2dD : 0.0543 R2D : -0.162
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.5 (0.116) R2dE : 0.266 R2E : -0.038
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.23 (0.0834) R2dN8 : 0.43 R2N8 : 0.144
σ : 0.696
deviance : 223.03
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 23
memory length : 6029
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
207 0.676 8.01 1.5 0.437 -1.81 0.808 2.38 1.26 1.49 23.51 4915 -- --
208.63 0.673 8.07 0.866 0.473 -1.55 1.03 -- 1.19 2.26 23.04 5662 -- --
209.52 0.674 8.01 1.5 0.431 -1.81 -- 2.46 1.27 1.17 23.45 4885 -- --
212.2 0.678 8.08 0.847 0.48 -1.55 -- -- 1.19 2.21 23 5674 -- --
220.27 0.691 8 1.53 -- -1.79 -- 2.63 1.27 -- 23.61 4761 -- --
293.98 0.804 8.14 0.209 0.371 -- 0.815 -- 0.901 2.48 -- -- -- --
296.32 0.806 8.14 0.188 0.371 -- -- -- 0.897 2.15 -- -- -- --
223.03 0.696 8.07 0.856 -- -1.5 -- -- 1.23 -- 23 6029 -- --
226.7 0.701 8.14 -- 0.562 -1.29 -- -- 0.914 1.99 26.56 5604 -- --
304.55 0.815 8.14 0.204 -- -- -- -- 0.906 -- -- -- -- --
297.25 0.807 8.15 -- 0.375 -- -- -- 0.876 2.16 -- -- -- --
236.3 0.716 8.13 -- -- -1.22 -- -- 0.959 -- 26.68 6111 -- --
305.65 0.816 8.14 -- -- -- -- -- 0.883 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 197.04 wind 9 43200 < th dose independent rect. 17 22
2 197.35 wind 7 43200 > th dose dependent rect. 18 21
6 198.12 wind 9 43200 > th dose dependent rect. 20 11
7 198.16 wind 9 43200 > th dose independent rect. 17 22
8 198.33 wind 9 43200 > th dose dependent rect. 14 18
9 198.49 wind 9 43200 < th dose independent rect. 19 20
23 199.48 wind 9 43200 > th dose dependent rect. 20 4
32 200.17 wind 7 43200 > th dose dependent rect. 14 23
34 200.26 wind 7 43200 > th dose dependent rect. 6 18
41 200.36 wind 9 43200 > th dose independent rect. 19 20
44 200.39 wind 7 43200 > th dose dependent rect. 6 16
68 200.61 wind 7 43200 > th dose dependent rect. 23 23
76 200.69 wind 9 43200 > th dose independent rect. 20 5
83 200.75 wind 9 43200 > th dose dependent sin 13 NA
91 200.81 wind 7 43200 > th dose dependent no NA NA
93 200.82 wind 9 43200 < th dose independent rect. 14 22
103 200.96 wind 9 43200 < th dose independent rect. 6 19
108 201.00 wind 9 43200 < th dose independent rect. 6 15
117 201.02 wind 9 43200 > th dose dependent sin 17 NA
133 201.19 wind 9 43200 > th dose independent rect. 14 22
162 201.43 wind 9 43200 < th dose independent rect. 22 23
172 201.56 wind 9 43200 < th dose independent rect. 2 23
173 201.57 wind 9 43200 < th dose independent rect. 2 19
183 201.63 wind 9 43200 < th dose independent no NA NA
184 201.63 wind 9 43200 > th dose independent rect. 17 19
189 201.64 wind 7 43200 > th dose dependent rect. 10 23
212 201.83 wind 9 43200 > th dose independent rect. 8 19
213 201.88 wind 9 43200 > th dose independent rect. 8 16
217 201.91 wind 9 43200 > th dose independent rect. 19 12
220 201.95 wind 9 43200 < th dose independent rect. 19 5
229 202.01 wind 9 43200 > th dose dependent rect. 17 15
238 202.08 wind 7 43200 > th dose dependent rect. 6 9
246 202.16 wind 9 43200 < th dose independent rect. 10 23
254 202.25 wind 9 43200 > th dose independent rect. 14 19
291 202.51 wind 9 43200 > th dose independent rect. 10 23
308 202.64 wind 7 43200 > th dose dependent rect. 23 16
315 202.67 wind 9 43200 > th dose independent rect. 24 23
316 202.69 wind 9 43200 > th dose independent rect. 19 23
317 202.69 wind 7 43200 > th dose dependent rect. 2 13
336 202.78 temperature 25 4320 > th dose independent rect. 6 2
342 202.84 wind 9 43200 > th dose independent rect. 22 23
345 202.85 wind 7 43200 > th dose dependent sin 1 NA
347 202.87 wind 5 43200 > th dose dependent sin 3 NA
348 202.87 atmosphere 1000 43200 < th dose dependent rect. 11 2
351 202.89 wind 9 43200 > th dose independent no NA NA
365 202.98 wind 9 43200 > th dose dependent rect. 11 21
369 203.03 temperature 25 4320 < th dose independent rect. 6 2
372 203.06 wind 9 43200 < th dose independent rect. 19 13
387 203.25 wind 9 43200 > th dose independent sin 12 NA
388 203.25 wind 3 43200 > th dose dependent rect. 9 1
392 203.30 atmosphere 1000 43200 < th dose dependent rect. 11 4
445 203.71 wind 5 43200 > th dose independent rect. 15 21
455 203.78 wind 5 43200 < th dose independent rect. 15 21
458 203.81 wind 9 43200 > th dose dependent rect. 10 13
501 204.13 wind 9 43200 > th dose dependent rect. 10 15
520 204.25 wind 9 43200 < th dose independent sin 12 NA
532 204.31 wind 5 43200 < th dose independent rect. 18 22
551 204.43 wind 5 43200 > th dose independent rect. 18 22
558 204.46 wind 7 43200 > th dose dependent rect. 9 5
590 204.59 wind 9 43200 < th dose independent sin 0 NA
713 205.20 wind 9 43200 < th dose independent rect. 7 8
725 205.28 wind 9 43200 > th dose independent sin 23 NA
788 205.62 wind 5 43200 > th dose dependent rect. 6 1
804 205.72 wind 5 43200 > th dose independent rect. 2 23
809 205.75 wind 5 43200 > th dose independent no NA NA
812 205.78 wind 5 43200 > th dose independent rect. 4 23
832 205.94 wind 5 43200 > th dose independent sin 2 NA
855 206.04 wind 5 43200 < th dose independent sin 2 NA
871 206.13 wind 9 43200 < th dose independent rect. 24 15
873 206.14 wind 9 43200 > th dose dependent rect. 17 9
881 206.17 wind 9 43200 > th dose dependent rect. 17 7
888 206.22 wind 7 43200 > th dose independent rect. 6 1
892 206.23 wind 9 43200 < th dose independent rect. 24 18
897 206.24 wind 5 43200 > th dose dependent rect. 20 1
902 206.26 wind 5 43200 > th dose independent rect. 4 12
911 206.27 wind 9 43200 < th dose independent rect. 22 20
920 206.30 wind 5 43200 < th dose independent no NA NA
928 206.33 wind 5 43200 < th dose independent rect. 4 12
933 206.35 wind 5 43200 > th dose independent rect. 19 2
936 206.35 wind 5 43200 < th dose independent rect. 2 23
945 206.40 wind 5 43200 > th dose independent rect. 7 23
954 206.42 wind 5 43200 < th dose independent rect. 4 23
985 206.53 temperature 25 4320 > th dose dependent rect. 8 1