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Os09g0337500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.65 (0.0358) R2 : 0.687
β1 : -3.51 (0.162) R2dD : 0.553 R2D : 0.159
β2 : 1.21 (0.0821) R2dC : 0.146 R2C : 0.148
β3 : -2.52 (0.164) R2dE : 0.296 R2E : -0.0605
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.365 (0.0852) R2dN8 : 0.0223 R2N8 : 0.103
σ : 0.645
deviance : 192.07
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C
peak time of C : 0.706
E
wheather : temperature
threshold : 19.78
memory length : 4829
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
189.17 0.646 7.6 -3.35 1.19 -2.82 0.497 -1.28 0.397 0.76 19.8 4830 -- --
191.02 0.644 7.64 -3.48 1.2 -2.52 0.502 -- 0.383 0.773 19.8 4829 -- --
189.88 0.642 7.59 -3.36 1.17 -2.89 -- -1.49 0.414 0.675 19.7 4830 -- --
192.07 0.645 7.65 -3.51 1.21 -2.52 -- -- 0.365 0.706 19.78 4829 -- --
275.98 0.774 7.59 -3.23 -- -2.78 -- -1.17 0.434 -- 19.7 3833 -- --
291.14 0.8 7.5 -1.95 1.23 -- 0.59 -- 1.02 0.711 -- -- -- --
292.61 0.801 7.5 -1.97 1.23 -- -- -- 1.02 0.661 -- -- -- --
277.42 0.776 7.63 -3.18 -- -2.17 -- -- 0.369 -- 21.13 3823 -- --
346.64 0.867 7.53 -- 1.21 -1.04 -- -- 0.904 0.572 22.4 1428 -- --
387.8 0.92 7.48 -1.93 -- -- -- -- 1.04 -- -- -- -- --
395.4 0.93 7.45 -- 1.2 -- -- -- 1.24 0.583 -- -- -- --
409.3 0.942 7.52 -- -- -1.24 -- -- 0.872 -- 22.37 891 -- --
486.16 1.03 7.43 -- -- -- -- -- 1.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 184.84 temperature 20 4320 < th dose independent rect. 6 1
2 184.99 temperature 20 4320 > th dose independent rect. 6 1
3 185.38 humidity 60 43200 < th dose independent rect. 20 14
4 185.73 humidity 60 43200 < th dose independent rect. 8 2
9 186.90 humidity 60 43200 > th dose independent rect. 20 14
13 187.25 temperature 25 1440 < th dose dependent rect. 5 1
14 187.28 temperature 10 1440 > th dose dependent rect. 5 1
16 187.60 temperature 20 4320 < th dose dependent rect. 1 2
21 187.90 temperature 20 1440 < th dose independent rect. 4 3
22 187.90 humidity 60 43200 < th dose independent rect. 2 8
23 187.91 atmosphere 1015 43200 < th dose independent rect. 16 6
26 187.96 temperature 25 1440 < th dose dependent rect. 4 3
28 188.02 atmosphere 1015 43200 < th dose independent rect. 12 12
32 188.06 atmosphere 1015 43200 < th dose independent rect. 18 3
37 188.07 humidity 70 43200 < th dose dependent rect. 8 1
39 188.09 humidity 60 43200 > th dose independent rect. 8 1
52 188.30 atmosphere 1015 43200 > th dose independent rect. 12 12
62 188.47 atmosphere 1015 43200 > th dose independent rect. 16 7
65 188.50 atmosphere 1015 43200 > th dose independent rect. 17 5
75 188.60 temperature 20 1440 > th dose independent rect. 4 3
115 189.22 humidity 60 43200 < th dose dependent rect. 19 18
121 189.29 atmosphere 1015 43200 < th dose independent sin 17 NA
136 189.46 humidity 60 43200 < th dose dependent rect. 11 1
187 189.87 atmosphere 1015 43200 < th dose independent rect. 12 1
189 189.88 wind 9 43200 > th dose independent rect. 9 7
197 189.96 atmosphere 1015 43200 > th dose independent sin 18 NA
215 190.12 atmosphere 1015 43200 > th dose independent rect. 12 1
241 190.26 humidity 60 43200 < th dose dependent sin 7 NA
249 190.29 atmosphere 1015 43200 > th dose independent rect. 21 1
256 190.32 humidity 60 43200 < th dose dependent rect. 24 13
300 190.52 humidity 60 43200 < th dose dependent rect. 7 6
321 190.61 temperature 20 4320 > th dose independent rect. 22 1
356 190.79 atmosphere 1015 14400 > th dose dependent rect. 23 1
362 190.81 wind 9 43200 > th dose independent rect. 10 4
494 191.24 temperature 20 4320 < th dose independent rect. 22 1
551 191.40 radiation 10 43200 < th dose independent rect. 12 1
562 191.45 humidity 50 43200 < th dose independent rect. 11 1
578 191.51 atmosphere 1015 43200 < th dose independent no NA NA
589 191.55 radiation 30 43200 < th dose independent rect. 11 1
597 191.60 atmosphere 1015 43200 < th dose independent rect. 17 23
660 191.79 temperature 25 1440 < th dose dependent sin 8 NA
733 191.96 temperature 20 4320 < th dose independent rect. 22 13
789 192.13 wind 9 43200 < th dose independent rect. 9 7
795 192.16 temperature 25 14400 < th dose independent rect. 10 1
797 192.16 temperature 20 4320 < th dose independent rect. 16 15
818 192.22 temperature 20 4320 > th dose independent rect. 22 13
819 192.22 temperature 20 4320 < th dose independent rect. 13 18
824 192.23 temperature 20 4320 < th dose independent sin 8 NA
832 192.25 atmosphere 1015 43200 > th dose independent no NA NA
857 192.34 temperature 20 4320 < th dose independent rect. 1 9
860 192.34 atmosphere 1015 43200 > th dose independent rect. 16 23
866 192.35 temperature 20 4320 < th dose independent rect. 22 16
905 192.46 atmosphere 1015 43200 > th dose independent rect. 21 23
941 192.54 temperature 20 4320 > th dose independent rect. 22 16
944 192.54 humidity 50 43200 > th dose independent rect. 19 21
992 192.67 atmosphere 1015 43200 > th dose dependent rect. 11 2