Os09g0284600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Enhancer of polycomb-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0284600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Enhancer of polycomb-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.33 | 0.196 | 10.3 | -0.338 | 0.0552 | 0.358 | -0.352 | -0.381 | 0.0321 | 10.4 | 20.63 | 710 | -- | -- |
| 17.44 | 0.194 | 10.3 | -0.257 | 0.0418 | 0.317 | -0.286 | -- | 0.0554 | 10.5 | 20.57 | 707 | -- | -- |
| 17.77 | 0.196 | 10.3 | -0.302 | 0.049 | 0.333 | -- | -0.152 | 0.0465 | 9.94 | 20.59 | 705 | -- | -- |
| 17.74 | 0.196 | 10.3 | -0.276 | 0.0586 | 0.354 | -- | -- | 0.0489 | 9.65 | 19.81 | 702 | -- | -- |
| 17.9 | 0.197 | 10.3 | -0.26 | -- | 0.313 | -- | 0.0348 | 0.0601 | -- | 19.89 | 704 | -- | -- |
| 19.84 | 0.209 | 10.3 | -0.168 | 0.0414 | -- | 0.342 | -- | 0.115 | 21.8 | -- | -- | -- | -- |
| 20.2 | 0.21 | 10.3 | -0.179 | 0.0575 | -- | -- | -- | 0.115 | 19 | -- | -- | -- | -- |
| 17.9 | 0.197 | 10.3 | -0.267 | -- | 0.324 | -- | -- | 0.057 | -- | 19.1 | 665 | -- | -- |
| 19.48 | 0.206 | 10.3 | -- | 0.0414 | 0.267 | -- | -- | 0.0986 | 8.99 | 22.14 | 665 | -- | -- |
| 20.38 | 0.211 | 10.3 | -0.18 | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
| 21.05 | 0.215 | 10.3 | -- | 0.0596 | -- | -- | -- | 0.135 | 18.8 | -- | -- | -- | -- |
| 19.56 | 0.206 | 10.3 | -- | -- | 0.241 | -- | -- | 0.102 | -- | 22 | 660 | -- | -- |
| 21.23 | 0.215 | 10.3 | -- | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 2 | 16.55 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 3 | 16.55 | temperature | 15 | 90 | > th | dose dependent | sin | 13 | NA |
| 8 | 16.59 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 20 | 16.64 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 28 | 16.67 | temperature | 30 | 30 | < th | dose dependent | sin | 14 | NA |
| 55 | 16.75 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 12 |
| 56 | 16.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 12 |
| 61 | 16.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 74 | 16.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 15 |
| 112 | 16.92 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 116 | 16.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 137 | 16.96 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 153 | 16.98 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 160 | 16.98 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 165 | 16.99 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 171 | 16.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 224 | 17.01 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 375 | 17.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 376 | 17.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 423 | 17.08 | atmosphere | 1000 | 14400 | < th | dose dependent | sin | 3 | NA |
| 491 | 17.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 499 | 17.11 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 511 | 17.11 | wind | 3 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 548 | 17.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 571 | 17.13 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 591 | 17.13 | temperature | 25 | 4320 | > th | dose dependent | sin | 13 | NA |
| 653 | 17.15 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 3 | NA |
| 654 | 17.15 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 3 | NA |
| 782 | 17.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 879 | 17.19 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 901 | 17.19 | atmosphere | 1000 | 14400 | < th | dose dependent | no | NA | NA |
| 991 | 17.20 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 13 | 23 |