BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0284600 Os09g0284600|AK072349
         (441 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79020.1  | chr1:29727282-29730059 REVERSE LENGTH=454          386   e-107
AT1G16690.1  | chr1:5706458-5709371 FORWARD LENGTH=440            382   e-106

>AT1G79020.1 | chr1:29727282-29730059 REVERSE LENGTH=454
          Length = 453

 Score =  386 bits (991), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/453 (48%), Positives = 275/453 (60%), Gaps = 49/453 (10%)

Query: 3   MSRLSFRPRPLDIHKKLPILKSAREFEDDD-PTXXXXXXXXXXXLLRQSXXXXXXXXXXX 61
           MSRLSFRPRPLDIHKKLPILKS ++FEDD+ PT           LLR +           
Sbjct: 1   MSRLSFRPRPLDIHKKLPILKSFKDFEDDETPTSTTRNSQ----LLRIASVEVDNEVAPV 56

Query: 62  XXXXXXXXXKKNIQEIPTPQFDAVDTYERDYTRTFAQPTCYIRGRGARAEIGEFVXXXXX 121
                    KK   EIPTPQF  VDTYERDY+ TF QP  Y+R RGAR+E+GEFV     
Sbjct: 57  PS-------KKPASEIPTPQFVIVDTYERDYSPTFGQPASYLRARGARSELGEFVEYDLD 109

Query: 122 XXXXXXXXXXXXXRKNLNPEKLEVLLFKLEILDHKARERAGAITPTFIGPVPVLLQLDAA 181
                        +K L PEKLE+++FKLE+LDHK RERAG ITPT   PVPVLLQ DAA
Sbjct: 110 NEDEDWLYEFDKDKKELPPEKLEIIIFKLEVLDHKTRERAGVITPTLGSPVPVLLQFDAA 169

Query: 182 MEALQYLSVRYGVFQAVYSYWKDKRERWQKPILRRLQ----------------------- 218
            + LQ LS+ YG FQA+++YWK+KR+RWQKPILRRLQ                       
Sbjct: 170 SDVLQVLSINYGTFQAIFNYWKEKRKRWQKPILRRLQPPPPVNDTNPYNVFRPREKVHRL 229

Query: 219 ----MQRRENNIQSFEKLRMVRRNLDQAKALMDALVKREETKREAMECEVNLRRIQMKYK 274
               MQRRENN+QSFEKLR VRRNL QA+++++AL+KREE KR+ M+ EV+L+RIQ++Y+
Sbjct: 230 HTRRMQRRENNVQSFEKLRQVRRNLGQAQSILEALIKREEKKRDVMDSEVSLQRIQLQYR 289

Query: 275 HEAQLVDEGTALSGFQ--QVSSRFGSSEDDYADSDDTTTEQPYIRPPVF-RPRFADHKLS 331
           HE +L+++  A+ GFQ    S +FGSS+D+  DSDD T+ +   RP V    RF +  L+
Sbjct: 290 HETELLEDSLAMPGFQPTTTSYKFGSSDDELMDSDDHTSTRVRTRPAVIPSSRFTNLNLN 349

Query: 332 VIPTXXXXXXXXXXXXPQQNGWVFKRDPEEPVLLFTRPLDPEKLLAAGIKPP-PDPPIEN 390
              +              Q+GW+ + DP EPV+LFT+PL P+KL AAGI PP PD    +
Sbjct: 350 A--SHPGGIKQEVRRRQSQHGWLHRLDPNEPVMLFTKPLVPDKLAAAGIVPPTPD----S 403

Query: 391 GATMPPFRCXXXXXXXXXXXFDRWNPLLQTPIG 423
               PP R            FDRWNPL+Q+ I 
Sbjct: 404 SPGQPPSRFQGRIGRGGRIIFDRWNPLMQSHIN 436



>AT1G16690.1 | chr1:5706458-5709371 FORWARD LENGTH=440
          Length = 439

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/451 (50%), Positives = 269/451 (59%), Gaps = 51/451 (11%)

Query: 3   MSRLSFRPRPLDIHKKLPILKSAREFEDDDPTXXXXXXXXXXXLLRQSXXXXXXXXXXXX 62
           MSRLSFRPRPLDIHKKLPILKS ++FED+D             LLR S            
Sbjct: 1   MSRLSFRPRPLDIHKKLPILKSFKDFEDED---NPSSITRNSQLLRISAVEVVDNEVQPP 57

Query: 63  XXXXXXXXKKNIQEIPTPQFDAVDTYERDYTRTFAQPTCYIRGRGARAEIGEFVXXXXXX 122
                   KK I EIPTPQ+  VDTYERDY+RTF QP  Y+R RGARAE+GEFV      
Sbjct: 58  VPS-----KKLISEIPTPQYLVVDTYERDYSRTFNQPASYLRARGARAELGEFVEYDLDN 112

Query: 123 XXXXXXXXXXXXRKNLNPEKLEVLLFKLEILDHKARERAGAITPTFIGPVPVLLQLDAAM 182
                          L+PE LE+++FKLE+LDHKARERAG ITPT   PVPVLLQ DAA 
Sbjct: 113 DDDDWLYEYNKETMILSPEMLEIVIFKLEVLDHKARERAGVITPTLGLPVPVLLQPDAAG 172

Query: 183 EALQYLSVRYGVFQAVYSYWKDKRERWQKPILRRLQ------------------------ 218
           EAL+YLS++YGVF A+YSYWK+KRE WQKPILRRLQ                        
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVNDTNPYNVFRPREKAHRLH 232

Query: 219 ---MQRRENNIQSFEKLRMVRRNLDQAKALMDALVKREETKREAMECEVNLRRIQMKYKH 275
              MQ+RENN QSFEKLR VRRNLDQAK +++AL+KREE KR+ M  EV+L+RIQ+KYK+
Sbjct: 233 ARRMQQRENNAQSFEKLRQVRRNLDQAKTILEALIKREEKKRDFMASEVSLQRIQLKYKN 292

Query: 276 EAQLVDEGTALSGF-QQVSSRFGSSEDDYADSDDTTTEQPYIRPPVFRP--RFADHKLSV 332
           E +L+++  AL+GF    + RFGSSED++ DSDD TT Q   RP  F P  RF D  L+ 
Sbjct: 293 ETELLEDSLALAGFPLSTAYRFGSSEDEFMDSDDPTTTQTCTRPS-FTPHRRFTDSNLA- 350

Query: 333 IPTXXXXXXXXXXXXPQQNGWVFKRDPEEPVLLFTRPLDPEKLLAAGIKPPPDPPIENGA 392
                           ++ GW+ K +P EPV+LFT+ L P+KL AAGI PP D      A
Sbjct: 351 -----RAQAGSIKQEARRLGWLHKLNPNEPVMLFTKALVPDKLAAAGIIPPSD------A 399

Query: 393 TMPPFRCXXXXXXXXXXXFDRWNPLLQTPIG 423
                R            FDRWNPL Q  I 
Sbjct: 400 RSGRARFQGRMGRGGRIVFDRWNPLNQAHIN 430



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,944,666
Number of extensions: 295242
Number of successful extensions: 1124
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1112
Number of HSP's successfully gapped: 2
Length of query: 441
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 339
Effective length of database: 8,310,137
Effective search space: 2817136443
Effective search space used: 2817136443
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)