Os09g0277800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase).
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Os09g0277800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.22 | 0.458 | 7.94 | 2.68 | 2.08 | 1.7 | 0.346 | 3.2 | 1.06 | 20.2 | 18.31 | 1036 | -- | -- |
| 98.82 | 0.463 | 8.02 | 1.99 | 2.1 | 1.58 | 0.774 | -- | 0.911 | 20.2 | 22.38 | 1087 | -- | -- |
| 95.44 | 0.455 | 7.93 | 2.7 | 2.05 | 1.72 | -- | 3.37 | 1.07 | 20.2 | 18.31 | 1000 | -- | -- |
| 99.38 | 0.464 | 8.02 | 1.96 | 1.84 | 1.8 | -- | -- | 0.898 | 20.3 | 22.47 | 881 | -- | -- |
| 221.53 | 0.693 | 7.88 | 2.29 | -- | 2.74 | -- | 2.51 | 1.09 | -- | 24.03 | 690 | -- | -- |
| 176.35 | 0.623 | 7.96 | 2.5 | 2.32 | -- | 1.05 | -- | 1.21 | 20.6 | -- | -- | -- | -- |
| 179.93 | 0.628 | 7.96 | 2.46 | 2.32 | -- | -- | -- | 1.21 | 20.6 | -- | -- | -- | -- |
| 211.97 | 0.678 | 7.98 | 1.78 | -- | 3.13 | -- | -- | 0.808 | -- | 23.85 | 696 | -- | -- |
| 188.06 | 0.639 | 8.1 | -- | 1.81 | 2.59 | -- | -- | 0.523 | 20.1 | 18.22 | 927 | -- | -- |
| 481.67 | 1.03 | 7.9 | 2.45 | -- | -- | -- | -- | 1.19 | -- | -- | -- | -- | -- |
| 339.76 | 0.862 | 8.02 | -- | 2.31 | -- | -- | -- | 0.934 | 20.7 | -- | -- | -- | -- |
| 288.3 | 0.791 | 8.05 | -- | -- | 3.45 | -- | -- | 0.513 | -- | 23.08 | 702 | -- | -- |
| 640.65 | 1.18 | 7.96 | -- | -- | -- | -- | -- | 0.915 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 16 |
| 9 | 91.91 | temperature | 30 | 720 | < th | dose dependent | sin | 0 | NA |
| 40 | 96.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 42 | 96.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 49 | 97.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 50 | 97.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 57 | 97.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 100 | 97.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 125 | 97.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 169 | 97.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 309 | 98.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 328 | 98.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 434 | 98.74 | temperature | 30 | 1440 | < th | dose dependent | sin | 20 | NA |
| 458 | 98.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 565 | 99.05 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 619 | 99.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 623 | 99.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 725 | 99.53 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |