BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0277800 Os09g0277800|AK103141
(371 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G05990.1 | chr2:2322876-2324867 FORWARD LENGTH=391 526 e-150
AT3G05260.1 | chr3:1497665-1498919 REVERSE LENGTH=290 54 1e-07
AT1G54870.1 | chr1:20459011-20460417 FORWARD LENGTH=336 52 5e-07
AT2G29260.1 | chr2:12582523-12583954 FORWARD LENGTH=323 51 9e-07
AT2G29290.2 | chr2:12586498-12587684 FORWARD LENGTH=263 49 3e-06
AT1G07440.1 | chr1:2286436-2287665 REVERSE LENGTH=267 49 4e-06
AT2G29150.1 | chr2:12535715-12536964 REVERSE LENGTH=269 49 6e-06
>AT2G05990.1 | chr2:2322876-2324867 FORWARD LENGTH=391
Length = 390
Score = 526 bits (1354), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/387 (70%), Positives = 300/387 (77%), Gaps = 22/387 (5%)
Query: 1 MGASVTTGLQMAAARPCIPACQRLL-------GSRAALPSFGR-ALSTQTGFASCRKTAS 52
M A+ + LQ+A RP + + ++L G+ S+ + + + Q C + S
Sbjct: 1 MAATAASSLQIATRRPSMSSPSKILKAGTYIVGANPGNASWDKLSCTRQLSNLGCLRNHS 60
Query: 53 AGPFVSLNHKR---FAVRAMSAQ-------GLPIDLRGKRAFIAGVADDNGYGWXXXXXX 102
A P KR F+ RAMS GLPIDLRGKRAFIAG+ADDNGYGW
Sbjct: 61 AVPTC----KRPFSFSTRAMSESSENKAPSGLPIDLRGKRAFIAGIADDNGYGWAIAKSL 116
Query: 103 XXXXXEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDSPEDVPD 162
EILVGTWVPALNIFETSLRRGKFD+SR LPDGSLMEI KVY LDAVFD+PEDVP+
Sbjct: 117 AAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYALDAVFDNPEDVPE 176
Query: 163 DVKANKRYAGSSNWTVKEVAETVKNDFGTIDILVHSLANGPEVKNSLLETSRKGYLAAVS 222
DVK NKRYAGSSNWTV+E AE VK DFG+IDILVHSLANGPEV LLETSRKGYLAA+S
Sbjct: 177 DVKTNKRYAGSSNWTVQEAAECVKKDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAIS 236
Query: 223 ASSYSFISLLQHFLPIMNPGGATISLTYIASERTIPGYGGGMSSAKAALESDTRVLAYEA 282
ASSYSF+SLL+HFLPIMNPGGA+ISLTYIASER IPGYGGGMSSAKAALESDTRVLAYEA
Sbjct: 237 ASSYSFVSLLRHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAYEA 296
Query: 283 GRKGKIRVNTISAGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLASPL 342
GRK IRVNTISAGPLGSRAAKAIGFI+ MIEYSY N P+QK L ADEVGN AAFLASPL
Sbjct: 297 GRKSNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNGPIQKTLTADEVGNAAAFLASPL 356
Query: 343 ASAITGSTIYVDNGLNTMGLALDSPTL 369
ASAITG+TIYVDNGLN MG+ALDSP
Sbjct: 357 ASAITGATIYVDNGLNAMGVALDSPVF 383
>AT3G05260.1 | chr3:1497665-1498919 REVERSE LENGTH=290
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 178 VKEVAETVKNDFGTIDILVHSLANGPEVKNSLLETSRKGYLAAVSASSYSFISLLQHFLP 237
K V E V N FG ID+LV+ A EV ++ +R + + S F L+++ L
Sbjct: 110 CKRVVEEVVNSFGRIDVLVNCAAEQHEVSIEDIDEARLERVFRTNIFSQFF--LVKYALK 167
Query: 238 IMNPGGATISLTYIASERTIPGYGGGMS-----SAKAALESDTRVLAYEAGRKGKIRVNT 292
M G + I+ T + + Y G S + K A+ S TR LA + KG IRVN
Sbjct: 168 HMKEGSSIINTTSVVA------YAGNSSLLEYTATKGAIVSFTRGLALQLAPKG-IRVNG 220
Query: 293 ISAGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLA-SPLASAITGSTI 351
++ GP+ + A F E+ I+ P+++ EV + FLA + +S TG +
Sbjct: 221 VAPGPVWTPLIPA-SFSEEAIKQFGSETPMKRAAQPVEVAPSYVFLACNHCSSYYTGQIL 279
Query: 352 YVDNGL 357
+ + GL
Sbjct: 280 HPNGGL 285
>AT1G54870.1 | chr1:20459011-20460417 FORWARD LENGTH=336
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 17/186 (9%)
Query: 178 VKEVAETVKNDFGTIDILVHSLANGPEVKNSLLETSRKGYLAAVSASS-YSFISLLQHFL 236
K V + V N FG ID+L+++ A + ++S +E + L V ++ +S+ L +H L
Sbjct: 155 CKRVVDEVVNAFGRIDVLINNAAE--QYESSTIEEIDEPRLERVFRTNIFSYFFLTRHAL 212
Query: 237 PIMNPGGATISLTYIASERTIPGYGGGMS-----SAKAALESDTRVLAYEAGRKGKIRVN 291
M G + I+ T ++ Y G S + K A+ + TR LA + KG IRVN
Sbjct: 213 KHMKEGSSIINTT------SVNAYKGNASLLDYTATKGAIVAFTRGLALQLAEKG-IRVN 265
Query: 292 TISAGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLA-SPLASAITGST 350
++ GP+ + A F E+ I+ P+++ EV + FLA + +S TG
Sbjct: 266 GVAPGPIWTPLIPA-SFNEEKIKNFGSEVPMKRAGQPIEVAPSYVFLACNHCSSYFTGQV 324
Query: 351 IYVDNG 356
++ + G
Sbjct: 325 LHPNGG 330
>AT2G29260.1 | chr2:12582523-12583954 FORWARD LENGTH=323
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 181 VAETVKNDF-GTIDILVHSLANGPEVKNSLLETSRKGYLAAVSASSYSFISLLQHFLPIM 239
+ ETV + F G + ILV+++ G ++ ++E + + +S + S L Q P++
Sbjct: 137 LMETVSSVFEGKLHILVNNV--GTNIRKPMVEFTAGEFSTLMSTNFESVFHLCQLAYPLL 194
Query: 240 NPGGATISLTYIASERTIPGY-----GGGMSSAKAALESDTRVLAYEAGRKGKIRVNTIS 294
A S+ +I+S + G+ SS K A+ TR LA E K IR+N ++
Sbjct: 195 RESKAG-SVVFISS---VSGFVSLKNMSVQSSTKGAINQLTRSLACEWA-KDNIRINAVA 249
Query: 295 AGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLASPLASAITGSTIYVD 354
+ + + + ++ +E Y PL + EV + AFL P +S ITG + VD
Sbjct: 250 PWYIKTSMVEQVLSNKEYLEEVYSVTPLGRLGEPREVSSAVAFLCLPASSYITGQILCVD 309
Query: 355 NGLNTMGL 362
G++ G
Sbjct: 310 GGMSINGF 317
>AT2G29290.2 | chr2:12586498-12587684 FORWARD LENGTH=263
Length = 262
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 179 KEVAETVKNDF-GTIDILVH---SLANGPEVKNSLLETSRKGYLAAVSASSYSFISLLQH 234
+++ ETV + F G ++ILV+ +L P + + E S +L A + S IS L H
Sbjct: 74 EKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFS---FLMATNLDSAFHISQLAH 130
Query: 235 FLPIMNPGGATISLTYIASERTIPGYGGGMSSAKAALESDTRVLAYEAGRKGKIRVNTIS 294
L + G+ + ++ IA + G G + K A+ R LA E IR N I
Sbjct: 131 PLLKASGSGSIVLMSSIAGVVHV-GVGSIYGATKGAMNQLARNLACEWASD-NIRTNAIC 188
Query: 295 AGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLASPLASAITGSTIYVD 354
+ + + +E+M + + P+ + A+EV AFL P AS ITG I VD
Sbjct: 189 PWLITTPLISDLLSVEEMKKEAEERTPMGRVGEANEVSPLVAFLCLPAASYITGQVICVD 248
Query: 355 NGLNTMGLA 363
GL G +
Sbjct: 249 GGLTVNGFS 257
>AT1G07440.1 | chr1:2286436-2287665 REVERSE LENGTH=267
Length = 266
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 179 KEVAETVKNDFG-TIDILVHSLANGPEVKNSLLETSRKGYLAAVSASSYSFISLLQHFLP 237
+++ +TV + FG +DIL+++L G L+ + + + +S + S L Q P
Sbjct: 79 EKLMQTVSSMFGGKLDILINNL--GAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 136
Query: 238 IMNPGGA--TISLTYIASERTIPGYGGGMSSAKAALESDTRVLAYEAGRKGKIRVNTISA 295
++ G I ++ IA + G S+ K AL R LA E G IR N ++
Sbjct: 137 LLKASGCGNIIFMSSIAGVVS-ASVGSIYSATKGALNQLARNLACEWASDG-IRANAVAP 194
Query: 296 GPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLASPLASAITGSTIYVDN 355
+ + A+A+ + ++ + PL + +EV + AFL P AS ITG TI VD
Sbjct: 195 AVIATPLAEAV-YDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG 253
Query: 356 GLNTMGLA 363
GL G +
Sbjct: 254 GLTVNGFS 261
>AT2G29150.1 | chr2:12535715-12536964 REVERSE LENGTH=269
Length = 268
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 179 KEVAETVKNDF-GTIDILVHSLANGPEVKNSLLETSRKGYLAAVSASSYSFISLLQHFLP 237
+++ ETV + F G ++ILV++ G ++ +L A + S +S + H P
Sbjct: 83 EKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLESAFHLSQIAH--P 140
Query: 238 IMNPGGATISLTYIASERTIPGYGGGMSSA-KAALESDTRVLAYEAGRKGKIRVNTISAG 296
++ G+ S+ +++S + G + A K A+ R LA E IRVN++
Sbjct: 141 LLKASGSG-SIVFMSSVAGLVHTGASIYGASKGAMNQLGRSLACEWASD-NIRVNSVCPW 198
Query: 297 PLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLASPLASAITGSTIYVDNG 356
+ + I EK+ + P+ + A+EV + AFL P AS ITG TI VD G
Sbjct: 199 VITTPLTSFIFSDEKLRKAVEDKTPMGRVGEANEVSSLVAFLCFPAASYITGQTICVDGG 258
Query: 357 LNTMGLAL 364
+ G +
Sbjct: 259 ASVNGFSF 266
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,178,546
Number of extensions: 281542
Number of successful extensions: 743
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 749
Number of HSP's successfully gapped: 12
Length of query: 371
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 271
Effective length of database: 8,364,969
Effective search space: 2266906599
Effective search space used: 2266906599
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)