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Os09g0261300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 4-nitrophenylphosphatase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0189) R2 : 0.44
β1 : -1.19 (0.0694) R2dD : 0.374 R2D : 0.236
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.451 (0.0405) R2dN8 : 0.204 R2N8 : 0.0656
σ : 0.356
deviance : 57.93
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.07 0.29 11 -1.11 0.575 -0.617 -1.11 2.93 -0.483 8.01 10 731 -- --
47.81 0.322 11 -1.13 0.578 -0.631 0.215 -- -0.477 8.04 9.922 722 -- --
41.78 0.301 11 -1.11 0.575 -0.617 -- 2.93 -0.483 8.01 10 731 -- --
47.89 0.322 11 -1.16 0.582 -0.599 -- -- -0.476 8.22 9.99 730 -- --
43.97 0.309 11 -1.37 -- -0.362 -- 2.65 -0.531 -- 30 1795 -- --
49.69 0.33 11 -1.15 0.323 -- -0.617 -- -0.442 12.5 -- -- -- --
51.02 0.335 11 -1.18 0.331 -- -- -- -0.447 11.6 -- -- -- --
47.93 0.322 10.9 -0.99 -- -1.26 -- -- -0.346 -- 59.97 294 -- --
71.38 0.393 11 -- 0.367 -0.934 -- -- -0.492 10.4 9.74 6408 -- --
57.93 0.356 11 -1.19 -- -- -- -- -0.451 -- -- -- -- --
87.71 0.438 11 -- 0.346 -- -- -- -0.316 11.9 -- -- -- --
55.82 0.348 10.9 -- -- -1.83 -- -- -0.208 -- 68.03 4847 -- --
95.23 0.455 11 -- -- -- -- -- -0.319 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.82 humidity 60 43200 < th dose dependent rect. 19 14
3 35.97 humidity 60 43200 < th dose dependent rect. 19 9
7 36.07 humidity 60 43200 < th dose dependent rect. 19 3
14 36.39 radiation 30 1440 < th dose independent rect. 11 1
17 36.64 radiation 10 1440 < th dose independent sin 14 NA
19 36.68 radiation 10 1440 < th dose independent rect. 15 15
20 36.70 radiation 10 1440 < th dose independent rect. 15 2
21 36.74 radiation 30 1440 < th dose dependent rect. 11 1
22 36.76 radiation 10 1440 < th dose independent rect. 15 5
24 36.77 humidity 60 43200 > th dose independent rect. 19 9
25 36.77 radiation 10 1440 < th dose independent rect. 15 10
26 36.77 radiation 10 1440 < th dose independent rect. 15 12
29 36.78 humidity 60 43200 < th dose independent rect. 19 9
33 36.78 radiation 10 1440 < th dose independent rect. 14 17
39 36.81 humidity 50 43200 > th dose independent rect. 20 13
58 37.08 humidity 50 43200 < th dose independent rect. 20 13
65 37.17 radiation 10 720 < th dose independent rect. 21 22
66 37.20 humidity 60 43200 < th dose independent rect. 19 4
84 37.26 radiation 40 4320 < th dose independent rect. 15 17
90 37.32 temperature 15 43200 < th dose dependent rect. 3 1
92 37.33 radiation 10 1440 < th dose independent rect. 9 22
96 37.35 temperature 15 43200 < th dose dependent rect. 2 5
99 37.37 radiation 10 720 < th dose dependent rect. 21 22
117 37.42 temperature 15 43200 < th dose dependent rect. 5 1
144 37.51 radiation 40 14400 < th dose independent rect. 19 13
153 37.54 radiation 40 14400 < th dose independent rect. 22 10
160 37.56 radiation 40 14400 < th dose independent rect. 7 1
224 37.72 temperature 15 43200 < th dose dependent sin 6 NA
259 37.80 radiation 1 1440 > th dose dependent rect. 10 3
265 37.81 radiation 10 720 < th dose independent rect. 5 18
267 37.81 radiation 10 720 < th dose independent rect. 11 23
271 37.82 radiation 10 1440 < th dose independent rect. 9 10
277 37.83 humidity 50 43200 < th dose independent rect. 8 1
329 37.88 radiation 1 1440 > th dose dependent rect. 11 1
343 37.89 temperature 15 43200 < th dose dependent rect. 13 17
347 37.90 humidity 50 43200 < th dose independent rect. 6 3
356 37.90 temperature 15 43200 < th dose dependent rect. 15 15
407 37.94 humidity 60 43200 < th dose dependent rect. 4 5
492 38.00 radiation 10 720 < th dose independent rect. 1 22
521 38.01 radiation 10 1440 < th dose dependent rect. 8 23
522 38.02 humidity 50 43200 > th dose independent rect. 8 1
523 38.02 radiation 20 1440 > th dose independent rect. 11 1
527 38.02 temperature 15 43200 < th dose dependent no NA NA
539 38.04 radiation 10 720 < th dose independent rect. 14 23
546 38.06 radiation 10 4320 < th dose independent rect. 17 8
547 38.06 radiation 10 4320 < th dose independent rect. 17 10
552 38.07 radiation 10 4320 < th dose independent rect. 17 3
601 38.10 radiation 40 14400 < th dose independent rect. 2 6
624 38.10 radiation 10 720 < th dose independent rect. 3 20
656 38.14 radiation 10 720 < th dose independent no NA NA
716 38.20 temperature 10 43200 < th dose independent rect. 3 2
717 38.20 radiation 20 1440 < th dose independent rect. 16 22
740 38.24 radiation 10 1440 < th dose dependent sin 23 NA
754 38.27 radiation 10 720 < th dose independent rect. 5 23
757 38.27 radiation 10 1440 < th dose dependent rect. 4 15
765 38.27 radiation 10 1440 < th dose dependent rect. 4 20
783 38.28 radiation 10 1440 < th dose dependent no NA NA
785 38.28 radiation 10 1440 < th dose dependent rect. 7 13
826 38.29 radiation 10 1440 < th dose dependent rect. 7 17
846 38.30 radiation 10 720 < th dose independent rect. 3 23
879 38.32 radiation 30 14400 > th dose dependent rect. 7 1
905 38.33 radiation 10 1440 < th dose dependent rect. 18 23
912 38.35 temperature 10 43200 > th dose independent rect. 3 2
916 38.35 radiation 10 1440 < th dose dependent rect. 11 23
924 38.37 radiation 20 1440 < th dose independent rect. 6 11